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Timely assessment of compound toxicity is one of the biggest challenges facing the pharmaceutical industry today. A significant proportion of compounds identified as potential leads are ultimately discarded due to the toxicity they induce.…

Machine Learning · Statistics 2018-06-13 Mikhail Zaslavskiy , Simon Jégou , Eric W. Tramel , Gilles Wainrib

Everyday we are exposed to various chemicals via food additives, cleaning and cosmetic products and medicines -- and some of them might be toxic. However testing the toxicity of all existing compounds by biological experiments is neither…

Machine Learning · Statistics 2015-03-06 Thomas Unterthiner , Andreas Mayr , Günter Klambauer , Sepp Hochreiter

Suicidal ideation detection from social media is an evolving research with great challenges. Many of the people who have the tendency to suicide share their thoughts and opinions through social media platforms. As part of many researches it…

Information Retrieval · Computer Science 2021-12-21 Shini Renjith , Annie Abraham , Surya B. Jyothi , Lekshmi Chandran , Jincy Thomson

Long Short-Term Memory (LSTM) neural network models have become the cornerstone for sequential data modeling in numerous applications, ranging from natural language processing to time series forecasting. Despite their success, the problem…

Machine Learning · Statistics 2026-05-26 Fahad Mostafa

Ransomware continues to evolve as one of the most disruptive cyber threats, with recent variants increasingly leveraging automated and AI-assisted techniques to evade traditional signature-based defenses. Early detection of such attacks…

Cryptography and Security · Computer Science 2026-04-21 Prabhudarshi Nayak , Gogulakrishnan Thiyagarajan , Debashree Priyadarshini , Vinay Bist , Rohan Swain

Text simplification (TS) aims to reduce the lexical and structural complexity of a text, while still retaining the semantic meaning. Current automatic TS techniques are limited to either lexical-level applications or manually defining a…

Computation and Language · Computer Science 2016-09-14 Tong Wang , Ping Chen , Kevin Amaral , Jipeng Qiang

In silico prediction of cardiotoxicity with high sensitivity and specificity for potential drug molecules can be of immense value. Hence, building machine learning classification models, based on some features extracted from the molecular…

Quantitative Methods · Quantitative Biology 2021-06-09 Aditya Sarkar , Arnav Bhavsar

As Artificial Intelligence (AI) technologies continue to gain traction in the modern-day world, they ultimately pose an immediate threat to current cybersecurity systems via exploitative methods. Prompt engineering is a relatively new field…

Cryptography and Security · Computer Science 2023-12-05 Haiyan Xuan , Mohith Manohar

This work presents a deep-learning approach to estimate atmospheric density profiles for use in planetary entry guidance problems. A long short-term memory (LSTM) neural network is trained to learn the mapping between measurements available…

Systems and Control · Electrical Eng. & Systems 2023-10-31 Jens A. Rataczak , Davide Amato , Jay W. McMahon

Despite their strong performance, large language models (LLMs) face challenges in real-world application of lexical simplification (LS), particularly in privacy-sensitive and resource-constrained environments. Moreover, since vulnerable…

Computation and Language · Computer Science 2025-09-30 Akio Hayakawa , Stefan Bott , Horacio Saggion

Designing safe and sustainable chemicals is critical to combat chemical pollution in our environment. Machine learning (ML) methods have been developed to aid with de novo molecule design. However, data on the environmental impacts of…

Human-Computer Interaction · Computer Science 2026-05-18 Coelina Robinson , Franziska Weissbach , Kjell Jorner , Mennatallah El-Assady , Christina Humer

Machine learning is widely used to analyze biological sequence data. Non-sequential models such as SVMs or feed-forward neural networks are often used although they have no natural way of handling sequences of varying length. Recurrent…

Quantitative Methods · Quantitative Biology 2016-03-14 Søren Kaae Sønderby , Casper Kaae Sønderby , Henrik Nielsen , Ole Winther

Purpose: Large Language Models (LLMs) like GPT (Generative Pre-trained Transformer) from OpenAI and LLaMA (Large Language Model Meta AI) from Meta AI are increasingly recognized for their potential in the field of cheminformatics,…

Biomolecules · Quantitative Biology 2024-05-22 Shaghayegh Sadeghi , Alan Bui , Ali Forooghi , Jianguo Lu , Alioune Ngom

Design of new drugs is a challenging process: a candidate molecule should satisfy multiple conditions to act properly and make the least side-effect -- perfect candidates selectively attach to and influence only targets, leaving off-targets…

Biomolecules · Quantitative Biology 2024-05-07 Andrij Rovenchak , Maksym Druchok

We demonstrate how machine learning is able to model experiments in quantum physics. Quantum entanglement is a cornerstone for upcoming quantum technologies such as quantum computation and quantum cryptography. Of particular interest are…

Machine Learning · Computer Science 2022-07-04 Thomas Adler , Manuel Erhard , Mario Krenn , Johannes Brandstetter , Johannes Kofler , Sepp Hochreiter

Virtual screening is a technique used in drug discovery to select the most promising molecules to test in a lab. To perform virtual screening, we need a large set of molecules as input, and storing these molecules can become an issue. In…

Computational Engineering, Finance, and Science · Computer Science 2024-05-01 Gianmarco Accordi , Davide Gadioli , Giorgio Seguini , Andrea R. Beccari , Gianluca Palermo

In the field of chemical structure recognition, the task of converting molecular images into machine-readable data formats such as SMILES string stands as a significant challenge, primarily due to the varied drawing styles and conventions…

Computer Vision and Pattern Recognition · Computer Science 2025-03-12 Yufan Chen , Ching Ting Leung , Yong Huang , Jianwei Sun , Hao Chen , Hanyu Gao

The advent of Large Language Models LLMs marks a milestone in Artificial Intelligence, altering how machines comprehend and generate human language. However, LLMs are vulnerable to malicious prompt injection attacks, where crafted inputs…

Computation and Language · Computer Science 2024-10-29 Sahasra Kokkula , Somanathan R , Nandavardhan R , Aashishkumar , G Divya

Pharmaceutical process design and development for generic, innovative, or personalized drugs have always been a time-consuming, costly, rigorous process, that involves multi-stage evaluation for better quality control and assurance. Large…

Emerging Technologies · Computer Science 2025-03-24 Leqi Lin , Xingyu Zhou , Kaiyuan Yang , Xizhong Chen

Despite the fundamental progress in autonomous molecular and materials discovery, data scarcity throughout chemical compound space still severely hampers the use of modern ready-made machine learning models as they rely heavily on the…

Chemical Physics · Physics 2023-11-30 Dominik Lemm , Guido Falk von Rudorff , O. Anatole von Lilienfeld