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Accurately determining and classifying the structure of complex networks is the focus of much current research. One class of network of particular interest are metabolic pathways, which have previously been studied from a graph theoretical…

Mathematical Physics · Physics 2012-10-10 Henry Dorrian , Kieran Smallbone , Jon borresen

We found that models of evolving random networks exhibit dynamic scaling similar to scaling of growing surfaces. It is demonstrated by numerical simulations of two variants of the model in which nodes are added as well as removed [Phys.…

Statistical Mechanics · Physics 2009-11-07 Miroslav Kotrla , Frantisek Slanina , Jakub Steiner

The study of network structure has uncovered signatures of the organization of complex systems. However, there is also a need to understand how to control them; for example, identifying strategies to revert a diseased cell to a healthy…

Molecular Networks · Quantitative Biology 2016-04-19 Alexander J. Gates , Luis M. Rocha

In this paper, we consider the problem of exploring structural regularities of networks by dividing the nodes of a network into groups such that the members of each group have similar patterns of connections to other groups. Specifically,…

Physics and Society · Physics 2015-05-30 Hua-Wei Shen , Xue-Qi Cheng , Jia-Feng Guo

We present a general model for the growth of weighted networks in which the structural growth is coupled with the edges' weight dynamical evolution. The model is based on a simple weight-driven dynamics and a weights' reinforcement…

Statistical Mechanics · Physics 2009-11-10 Alain Barrat , Marc Barthelemy , Alessandro Vespignani

This paper presents an evolution model of weighted networks in which the structural growth and weight dynamics are driven by human behavior, i.e. passenger route choice behavior. Transportation networks grow due to people's increasing…

Physics and Society · Physics 2007-09-27 Yihong Hu , Daoli Zhu , Nianqu Zhu

A central issue in the study of large complex network systems, such as power grids, financial networks, and ecological systems, is to understand their response to dynamical perturbations. Recent studies recognize that many real networks…

Adaptation and Self-Organizing Systems · Physics 2022-07-26 Chao Duan , Takashi Nishikawa , Deniz Eroglu , Adilson E. Motter

The paradigm of layered networks is used to describe many real-world systems -- from biological networks, to social organizations and transportation systems. Recently there has been much progress in understanding the general properties of…

Physics and Society · Physics 2016-10-05 Márton Pósfai , Jianxi Gao , Sean P. Cornelius , Albert-László Barabási , Raissa M. D'Souza

A mechanism for self-organization of the degree of connectivity in model neural networks is studied. Network connectivity is regulated locally on the basis of an order parameter of the global dynamics which is estimated from an observable…

Statistical Mechanics · Physics 2009-11-07 Stefan Bornholdt , Torsten Roehl

Determining design principles that boost robustness of interdependent networks is a fundamental question of engineering, economics, and biology. It is known that maximizing the degree correlation between replicas of the same node leads to…

Physics and Society · Physics 2019-08-21 Ivan Kryven , Ginestra Bianconi

Many growing networks possess accelerating statistics where the number of links added with each new node is an increasing function of network size so the total number of links increases faster than linearly with network size. In particular,…

Molecular Networks · Quantitative Biology 2017-12-22 M. J. Gagen , J. S. Mattick

The recent paper by W.-X. Wang, Y.-C. Lai, J. Ren, B. Li & C. Grebogi [arXiv:1107.2177v1] proposed a method for the control of complex networks with nonlinear dynamics based on linearizing the system around a finite number of local desired…

Disordered Systems and Neural Networks · Physics 2011-09-01 Jie Sun , Sean P. Cornelius , William L. Kath , Adilson E. Motter

We introduce a model for dynamic networks, where the links or the strengths of the links change over time. We solve the model by mapping dynamic networks to the problem of directed percolation, where the direction corresponds to the…

Disordered Systems and Neural Networks · Physics 2015-05-13 Roni Parshani , Mark Dickison , Reuven Cohen , H. Eugene Stanley , Shlomo Havlin

In this article, we consider transport networks with uncertain demands. Network dynamics are given by linear hyperbolic partial differential equations and suitable coupling conditions, while demands are incorporated as solutions to…

Optimization and Control · Mathematics 2022-08-16 Simone Göttlich , Thomas Schillinger

With the emerging of new networks, such as wireless sensor networks, vehicle networks, P2P networks, cloud computing, mobile Internet, or social networks, the network dynamics and complexity expands from system design, hardware, software,…

Social and Information Networks · Computer Science 2013-05-07 Jianguo Ding , Pascal Bouvry

Minimum driver node sets (MDSs) play an important role in studying the structural controllability of complex networks. Recent research has shown that MDSs tend to avoid high-degree nodes. However, this observation is based on the analysis…

Mathematical Physics · Physics 2015-06-16 Xizhe Zhang , Tianyang Lv , Xueying Yang , Bin Zhang

Reconstructing the states of the nodes of a dynamical network is a problem of fundamental importance in the study of neuronal and genetic networks. An underlying related problem is that of observability, i.e., identifying the conditions…

Pattern Formation and Solitons · Physics 2017-03-31 Afroza Shirin , Dionicio F. Rios , Francesco Sorrentino

Influence diagram is a graphical representation of belief networks with uncertainty. This article studies the structural properties of a probabilistic model in an influence diagram. In particular, structural controllability theorems and…

Artificial Intelligence · Computer Science 2013-03-25 Brian Y. Chan , Ross D. Shachter

Biological processes, including cell differentiation, organism development, and disease progression, can be interpreted as attractors (fixed points or limit cycles) of an underlying networked dynamical system. In this paper, we study the…

Systems and Control · Computer Science 2017-01-20 Andrew Clark , Phillip Lee , Basel Alomair , Linda Bushnell , Radha Poovendran

Network controllability robustness reflects how well a networked dynamical system can maintain its controllability against destructive attacks. This paper investigates the network controllability robustness from the perspective of a…

Physics and Society · Physics 2021-03-09 Yang Lou , Lin Wang , Guanrong Chen