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We present a novel graph-based neural network model for relation extraction. Our model treats multiple pairs in a sentence simultaneously and considers interactions among them. All the entities in a sentence are placed as nodes in a…

Computation and Language · Computer Science 2020-03-16 Fenia Christopoulou , Makoto Miwa , Sophia Ananiadou

In Question Answering (QA), Retrieval Augmented Generation (RAG) has revolutionized performance in various domains. However, how to effectively capture multi-document relationships, particularly critical for biomedical tasks, remains an…

Computation and Language · Computer Science 2025-04-03 Lingxiao Guan , Yuanhao Huang , Jie Liu

Heterogeneous Text-Attributed Graphs (HTAGs), where different types of entities are not only associated with texts but also connected by diverse relationships, have gained widespread popularity and application across various domains.…

Machine Learning · Computer Science 2024-12-13 Yunhui Liu , Qizhuo Xie , Jinwei Shi , Jiaxu Shen , Tieke He

Document-level relation extraction (DocRE) poses the challenge of identifying relationships between entities within a document as opposed to the traditional RE setting where a single sentence is input. Existing approaches rely on logical…

Information Retrieval · Computer Science 2024-01-23 Monika Jain , Raghava Mutharaju , Ramakanth Kavuluru , Kuldeep Singh

Materials science literature contains millions of materials synthesis procedures described in unstructured natural language text. Large-scale analysis of these synthesis procedures would facilitate deeper scientific understanding of…

Computation and Language · Computer Science 2019-07-16 Sheshera Mysore , Zach Jensen , Edward Kim , Kevin Huang , Haw-Shiuan Chang , Emma Strubell , Jeffrey Flanigan , Andrew McCallum , Elsa Olivetti

In recent work we have presented a formal framework for linguistic annotation based on labeled acyclic digraphs. These `annotation graphs' offer a simple yet powerful method for representing complex annotation structures incorporating…

Computation and Language · Computer Science 2007-05-23 Steven Bird , Mark Liberman

Large language model (LLM)-based agents have demonstrated strong capabilities in complex reasoning and problem solving through multi-step interactions, yet most deployed agents remain behaviorally static, with knowledge acquired during…

Artificial Intelligence · Computer Science 2026-05-19 Yuxin Jin , Siyuan Zhang , Hanchen Wang , Lu Qin , Ying Zhang , Wenjie Zhang

Logical reasoning over Knowledge Graphs (KGs) is a fundamental technique that can provide efficient querying mechanism over large and incomplete databases. Current approaches employ spatial geometries such as boxes to learn query…

Machine Learning · Computer Science 2021-11-02 Nurendra Choudhary , Nikhil Rao , Sumeet Katariya , Karthik Subbian , Chandan K. Reddy

Representation learning is a critical ingredient for natural language processing systems. Recent Transformer language models like BERT learn powerful textual representations, but these models are targeted towards token- and sentence-level…

Computation and Language · Computer Science 2020-05-21 Arman Cohan , Sergey Feldman , Iz Beltagy , Doug Downey , Daniel S. Weld

Emotion is a crucial phenomenon in the functioning of human beings in society. However, it remains a widely open subject, particularly in its textual manifestations. This paper examines an industrial corpus manually annotated following an…

Computation and Language · Computer Science 2025-09-03 Jonas Noblet

Coreference resolution across multiple documents poses a significant challenge in natural language processing, particularly within the domain of knowledge graphs. This study introduces an innovative method aimed at identifying and resolving…

Computation and Language · Computer Science 2025-04-09 Zhang Dong , Mingbang Wang , Songhang deng , Le Dai , Jiyuan Li , Xingzu Liu , Ruilin Nong

Previous works on knowledge-to-text generation take as input a few RDF triples or key-value pairs conveying the knowledge of some entities to generate a natural language description. Existing datasets, such as WIKIBIO, WebNLG, and E2E,…

Computation and Language · Computer Science 2020-10-27 Liying Cheng , Dekun Wu , Lidong Bing , Yan Zhang , Zhanming Jie , Wei Lu , Luo Si

Document-level Event Argument Extraction (DEAE) aims to identify arguments and their specific roles from an unstructured document. The advanced approaches on DEAE utilize prompt-based methods to guide pre-trained language models (PLMs) in…

Computation and Language · Computer Science 2024-03-18 Jian Zhang , Changlin Yang , Haiping Zhu , Qika Lin , Fangzhi Xu , Jun Liu

Entailment Graphs (EGs) have been constructed based on extracted corpora as a strong and explainable form to indicate context-independent entailment relations in natural languages. However, EGs built by previous methods often suffer from…

Computation and Language · Computer Science 2023-06-08 Zhibin Chen , Yansong Feng , Dongyan Zhao

Predictive Process Monitoring focuses on predicting future states of ongoing process executions, such as forecasting the remaining time. Recent developments in Object-Centric Process Mining have enriched event data with objects and their…

Machine Learning · Computer Science 2024-04-17 Tim K. Smit , Hajo A. Reijers , Xixi Lu

This study introduces a novel approach to sentence-level relation extraction (RE) that integrates Graph Neural Networks (GNNs) with Large Language Models (LLMs) to generate contextually enriched support documents. By harnessing the power of…

Computation and Language · Computer Science 2024-11-01 Vicky Dong , Hao Yu , Yao Chen

Biological relation networks contain rich information for understanding the biological mechanisms behind the relationship of entities such as genes, proteins, diseases, and chemicals. The vast growth of biomedical literature poses…

Computation and Language · Computer Science 2025-01-27 Po-Ting Lai , Chih-Hsuan Wei , Shubo Tian , Robert Leaman , Zhiyong Lu

Advances in deep learning models have revolutionized the study of biomolecule systems and their mechanisms. Graph representation learning, in particular, is important for accurately capturing the geometric information of biomolecules at…

Quantitative Methods · Quantitative Biology 2023-04-07 Xinye Xiong , Bingxin Zhou , Yu Guang Wang

Machine-learning methods in biochemistry commonly represent molecules as graphs of pairwise intermolecular interactions for property and structure predictions. Most methods operate on a single graph, typically the minimal free energy (MFE)…

There is a growing need for methods which can capture uncertainties and answer queries over graph-structured data. Two common types of uncertainty are uncertainty over the attribute values of nodes and uncertainty over the existence of…

Databases · Computer Science 2013-05-31 Walaa Eldin Moustafa , Angelika Kimmig , Amol Deshpande , Lise Getoor
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