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Multiple network alignment is the problem of identifying similar and related regions in a given set of networks. While there are a large number of effective techniques for pairwise problems with two networks that scale in terms of edges,…

Social and Information Networks · Computer Science 2018-09-24 Huda Nassar , Georgios Kollias , Ananth Grama , David F. Gleich

In this paper, we address the problem of finding a correspondence, or matching, between the functions of two programs in binary form, which is one of the most common task in binary diffing. We introduce a new formulation of this problem as…

Machine Learning · Computer Science 2022-01-03 Elie Mengin , Fabrice Rossi

Subgraph matching is to find all subgraphs in a data graph that are isomorphic to an existing query graph. Subgraph matching is an NP-hard problem, yet has found its applications in many areas. Many learning-based methods have been proposed…

Discrete Mathematics · Computer Science 2022-11-09 Zixun Lan , Ye Ma , Limin Yu , LingLong Yuan , Fei Ma

Graph Neural Networks (GNNs) have emerged as powerful tools for predicting outcomes in graph-structured data. However, a notable limitation of GNNs is their inability to provide robust uncertainty estimates, which undermines their…

Machine Learning · Computer Science 2024-10-10 S. Akansha

The alignment of biological networks has the potential to teach us as much about biology and disease as has sequence alignment. Sequence alignment can be optimally solved in polynomial time. In contrast, network alignment is $NP$-hard,…

Molecular Networks · Quantitative Biology 2016-07-12 Nil Mamano , Wayne Hayes

An assignment of colours to the vertices of a graph is stable if any two vertices of the same colour have identically coloured neighbourhoods. The goal of colour refinement is to find a stable colouring that uses a minimum number of…

Data Structures and Algorithms · Computer Science 2015-09-29 Christoph Berkholz , Paul Bonsma , Martin Grohe

Graph similarity search is among the most important graph-based applications, e.g. finding the chemical compounds that are most similar to a query compound. Graph similarity computation, such as Graph Edit Distance (GED) and Maximum Common…

Machine Learning · Computer Science 2020-03-03 Yunsheng Bai , Hao Ding , Song Bian , Ting Chen , Yizhou Sun , Wei Wang

Graph Neural Networks (GNNs) have emerged as the de facto standard for modeling graph data, with attention mechanisms and transformers significantly enhancing their performance on graph-based tasks. Despite these advancements, the…

Machine Learning · Computer Science 2025-04-07 Nikhil Shivakumar Nayak

Graph embedding is a transformation of nodes of a graph into a set of vectors. A~good embedding should capture the graph topology, node-to-node relationship, and other relevant information about the graph, its subgraphs, and nodes. If these…

Social and Information Networks · Computer Science 2022-06-22 Arash Dehghan-Kooshkghazi , Bogumił Kamiński , Łukasz Kraiński , Paweł Prałat , François Théberge

Networks can model real-world systems in a variety of domains. Network alignment (NA) aims to find a node mapping that conserves similar regions between compared networks. NA is applicable to many fields, including computational biology,…

Social and Information Networks · Computer Science 2017-02-01 Vipin Vijayan , Dominic Critchlow , Tijana Milenkovic

Network alignment (NA) is the task of discovering node correspondences across different networks. Although NA methods have achieved remarkable success in a myriad of scenarios, their satisfactory performance is not without prior anchor link…

Social and Information Networks · Computer Science 2022-08-25 Jin-Duk Park , Cong Tran , Won-Yong Shin , Xin Cao

Large-scale classification of data where classes are structurally organized in a hierarchy is an important area of research. Top-down approaches that exploit the hierarchy during the learning and prediction phase are efficient for large…

Machine Learning · Computer Science 2017-06-06 Azad Naik , Huzefa Rangwala

Social network alignment, aligning different social networks on their common users, is receiving dramatic attention from both academic and industry. All existing studies consider the social network to be static and neglect its inherent…

Social and Information Networks · Computer Science 2019-11-04 Li Sun , Zhongbao Zhang , Pengxin Ji , Jian Wen , Sen Su , Philip S. Yu

Centrality describes the importance of nodes in a graph and is modeled by various measures. Its global analogue, called centralization, is a general formula for calculating a graph-level centrality score based on the node-level centrality…

Social and Information Networks · Computer Science 2022-05-03 Jose Mari E. Ortega , Rolito G. Eballe

A critical task in graph signal processing is to estimate the true signal from noisy observations over a subset of nodes, also known as the reconstruction problem. In this paper, we propose a node-adaptive regularization for graph signal…

Signal Processing · Electrical Eng. & Systems 2021-02-08 Maosheng Yang , Mario Coutino , Geert Leus , Elvin Isufi

Deep networks have achieved impressive results on a range of well-curated benchmark datasets. Surprisingly, their performance remains sensitive to perturbations that have little effect on human performance. In this work, we propose a novel…

Computer Vision and Pattern Recognition · Computer Science 2024-10-22 Jonas Ngnawe , Marianne Abemgnigni Njifon , Jonathan Heek , Yann Dauphin

\Graph similarity computation is an essential task in many real-world graph-related applications such as retrieving the similar drugs given a query chemical compound or finding the user's potential friends from the social network database.…

Machine Learning · Computer Science 2024-12-18 Jingjing Wang , Hongjie Zhu , Haoran Xie , Fu Lee Wang , Xiaoliang Xu , Yuxiang Wang

Similarity graphs are an active research direction for the nearest neighbor search (NNS) problem. New algorithms for similarity graph construction are continuously being proposed and analyzed by both theoreticians and practitioners.…

Machine Learning · Computer Science 2020-02-14 Dmitry Baranchuk , Artem Babenko

We propose a new model, the Neighbor Mixture Model (NMM), for modeling node labels in a graph. This model aims to capture correlations between the labels of nodes in a local neighborhood. We carefully design the model so it could be an…

Machine Learning · Computer Science 2021-04-20 Linfeng Liu , Michael C. Hughes , Li-Ping Liu

Graph Neural Networks (GNNs) have become mainstream methods for solving the semi-supervised node classification problem. However, due to the uneven location distribution of labeled nodes in the graph, labeled nodes are only accessible to a…

Machine Learning · Computer Science 2023-12-22 Weigang Lu , Ziyu Guan , Wei Zhao , Yaming Yang , Long Jin
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