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Graph refinement, or the task of obtaining subgraphs of interest from over-complete graphs, can have many varied applications. In this work, we extract trees or collection of sub-trees from image data by, first deriving a graph-based…

Computer Vision and Pattern Recognition · Computer Science 2020-06-03 Raghavendra Selvan , Thomas Kipf , Max Welling , Antonio Garcia-Uceda Juarez , Jesper H Pedersen , Jens Petersen , Marleen de Bruijne

Node embedding is the task of extracting informative and descriptive features over the nodes of a graph. The importance of node embeddings for graph analytics, as well as learning tasks such as node classification, link prediction and…

Machine Learning · Computer Science 2019-06-17 Dimitris Berberidis , Georgios B. Giannakis

Consistency training is a popular method to improve deep learning models in computer vision and natural language processing. Graph neural networks (GNNs) have achieved remarkable performance in a variety of network science learning tasks,…

Machine Learning · Computer Science 2021-10-14 Cole Hawkins , Vassilis N. Ioannidis , Soji Adeshina , George Karypis

Network alignment (NA) is the task of discovering node correspondences across multiple networks. Although NA methods have achieved remarkable success in a myriad of scenarios, their effectiveness is not without additional information such…

Social and Information Networks · Computer Science 2024-09-20 Jin-Duk Park , Cong Tran , Won-Yong Shin , Xin Cao

Network alignment (NA) compares networks with the goal of finding a node mapping that uncovers highly similar (conserved) network regions. Existing NA methods are homogeneous, i.e., they can deal only with networks containing nodes and…

Molecular Networks · Quantitative Biology 2018-03-30 Shawn Gu , John Johnson , Fazle E. Faisal , Tijana Milenkovic

Graph alignment aims at finding the vertex correspondence between two correlated graphs, a task that frequently occurs in graph mining applications such as social network analysis. Attributed graph alignment is a variant of graph alignment,…

Data Structures and Algorithms · Computer Science 2024-03-13 Ziao Wang , Ning Zhang , Weina Wang , Lele Wang

PPI network alignment aims to find topological and functional similarities between networks of different species. Several alignment approaches have been proposed. Each of these approaches relies on a different alignment method and uses…

Quantitative Methods · Quantitative Biology 2019-11-25 Sarra Ghanjeti

Network alignment aims to find regions of topological or functional similarities between networks. In computational biology, it can be used to transfer biological knowledge from a well-studied species to a poorly-studied species between…

Molecular Networks · Quantitative Biology 2014-10-21 Joseph Crawford , Tijana Milenković

As one of the most fundamental tasks in graph theory, subgraph matching is a crucial task in many fields, ranging from information retrieval, computer vision, biology, chemistry and natural language processing. Yet subgraph matching problem…

Machine Learning · Computer Science 2022-09-19 Zixun Lan , Limin Yu , Linglong Yuan , Zili Wu , Qiang Niu , Fei Ma

Structural heterogeneity between knowledge graphs is an outstanding challenge for entity alignment. This paper presents Neighborhood Matching Network (NMN), a novel entity alignment framework for tackling the structural heterogeneity…

Computation and Language · Computer Science 2020-05-13 Yuting Wu , Xiao Liu , Yansong Feng , Zheng Wang , Dongyan Zhao

Deep neural networks have been shown to be highly miscalibrated. often they tend to be overconfident in their predictions. It poses a significant challenge for safety-critical systems to utilise deep neural networks (DNNs), reliably. Many…

Machine Learning · Computer Science 2022-05-05 Aditya Singh , Alessandro Bay , Biswa Sengupta , Andrea Mirabile

Comparative analyses of graph structured datasets underly diverse problems. Examples of these problems include identification of conserved functional components (biochemical interactions) across species, structural similarity of large…

Quantum Physics · Physics 2014-09-25 Anmer Daskin , Ananth Grama , Sabre Kais

The graph is one of the most widely used mathematical structures in engineering and science because of its representational power and inherent ability to demonstrate the relationship between objects. The objective of this work is to…

Data Structures and Algorithms · Computer Science 2021-01-01 Shri Prakash Dwivedi

Image matching is a key component of many tasks in computer vision and its main objective is to find correspondences between features extracted from different natural images. When images are represented as graphs, image matching boils down…

Computer Vision and Pattern Recognition · Computer Science 2022-05-31 Nancy Xu , Giannis Nikolentzos , Michalis Vazirgiannis , Henrik Boström

Network alignment is the task of establishing one-to-one correspondences between the nodes of different graphs. Although finding a plethora of applications in high-impact domains, this task is known to be NP-hard in its general form.…

Machine Learning · Computer Science 2024-11-20 Jiashu He , Charilaos I. Kanatsoulis , Alejandro Ribeiro

The study of the topological structure of complex networks has fascinated researchers for several decades, and today we have a fairly good understanding of the types and reoccurring characteristics of many different complex networks.…

Social and Information Networks · Computer Science 2014-06-23 Matthieu Roy , Stefan Schmid , Gilles Trédan

Social network alignment has been an important research problem for social network analysis in recent years. With the identified shared users across networks, it will provide researchers with the opportunity to achieve a more comprehensive…

Social and Information Networks · Computer Science 2020-07-07 Yuxiang Ren , Lin Meng , Jiawei Zhang

This paper addresses the challenging problem of retrieval and matching of graph structured objects, and makes two key contributions. First, we demonstrate how Graph Neural Networks (GNN), which have emerged as an effective model for various…

Machine Learning · Computer Science 2019-05-14 Yujia Li , Chenjie Gu , Thomas Dullien , Oriol Vinyals , Pushmeet Kohli

We propose a novel benchmarking methodology for graph neural networks (GNNs) based on the graph alignment problem, a combinatorial optimization task that generalizes graph isomorphism by aligning two unlabeled graphs to maximize overlapping…

Machine Learning · Computer Science 2025-05-20 Adrien Lagesse , Marc Lelarge

Distances in a network capture relations between nodes and are the basis of centrality, similarity, and influence measures. Often, however, the relevance of a node $u$ to a node $v$ is more precisely measured not by the magnitude of the…

Social and Information Networks · Computer Science 2016-02-25 Eliav Buchnik , Edith Cohen