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Medical image segmentation is an important analysis task in clinical practice and research. Deep learning has massively advanced the field, but current approaches are mostly based on models trained for a specific task. Training such models…

Image and Video Processing · Electrical Eng. & Systems 2025-12-18 Anwai Archit , Luca Freckmann , Constantin Pape

Segmentation is essential for medical image analysis tasks such as intervention planning, therapy guidance, diagnosis, treatment decisions. Deep learning is becoming increasingly prominent for segmentation, where the lack of annotations,…

Computer Vision and Pattern Recognition · Computer Science 2019-03-19 Firat Ozdemir , Zixuan Peng , Christine Tanner , Philipp Fuernstahl , Orcun Goksel

To improve the classification performance in the context of hyperspectral image processing, many works have been developed based on two common strategies, namely the spatial-spectral information integration and the utilization of neural…

Computer Vision and Pattern Recognition · Computer Science 2020-06-24 Yi Liang , Xin Zhao , Alan J. X. Guo , Fei Zhu

Neuron segmentation in electron microscopy (EM) aims to reconstruct the complete neuronal connectome; however, current deep learning-based methods are limited by their reliance on large-scale training data and extensive, time-consuming…

Computer Vision and Pattern Recognition · Computer Science 2026-01-23 Liuyun Jiang , Yanchao Zhang , Jinyue Guo , Yizhuo Lu , Ruining Zhou , Hua Han

The throughput of electron microscopes has increased significantly in recent years, enabling detailed analysis of cell morphology and ultrastructure. Analysis of neural circuits at single-synapse resolution remains the flagship target of…

Computer Vision and Pattern Recognition · Computer Science 2019-08-07 Constantin Pape , Alex Matskevych , Adrian Wolny , Julian Hennies , Giula Mizzon , Marion Louveaux , Jacob Musser , Alexis Maizel , Detlev Arendt , Anna Kreshuk

Accurate segmentation of 3-D cell nuclei in microscopy images is essential for the study of nuclear organization, gene expression, and cell morphodynamics. Current image segmentation methods are challenged by the complexity and variability…

Image and Video Processing · Electrical Eng. & Systems 2022-03-18 Sundaresh Ram , Jeffrey J. Rodriguez

Accurately segmenting and individualizing cells in SEM images is a highly promising technique for elucidating tissue architecture in oncology. While current AI-based methods are effective, errors persist, necessitating time-consuming manual…

Image and Video Processing · Electrical Eng. & Systems 2025-04-11 Florian Robert , Alexia Calovoulos , Laurent Facq , Fanny Decoeur , Etienne Gontier , Christophe F. Grosset , Baudouin Denis de Senneville

Convolutional neural networks (CNNs) have been applied to various automatic image segmentation tasks in medical image analysis, including brain MRI segmentation. Generative adversarial networks have recently gained popularity because of…

Computer Vision and Pattern Recognition · Computer Science 2017-07-12 Pim Moeskops , Mitko Veta , Maxime W. Lafarge , Koen A. J. Eppenhof , Josien P. W. Pluim

This paper proposes a branched residual network for image classification. It is known that high-level features of deep neural network are more representative than lower-level features. By sharing the low-level features, the network can…

Computer Vision and Pattern Recognition · Computer Science 2017-02-22 Byungju Kim , Youngsoo Kim , Yeakang Lee , Junmo Kim

For complex segmentation tasks, fully automatic systems are inherently limited in their achievable accuracy for extracting relevant objects. Especially in cases where only few data sets need to be processed for a highly accurate result,…

Computer Vision and Pattern Recognition · Computer Science 2017-09-12 Mario Amrehn , Sven Gaube , Mathias Unberath , Frank Schebesch , Tim Horz , Maddalena Strumia , Stefan Steidl , Markus Kowarschik , Andreas Maier

We focus on tackling weakly supervised semantic segmentation with scribble-level annotation. The regularized loss has been proven to be an effective solution for this task. However, most existing regularized losses only leverage static…

Computer Vision and Pattern Recognition · Computer Science 2021-08-04 Bingfeng Zhang , Jimin Xiao , Yao Zhao

The need for labour intensive pixel-wise annotation is a major limitation of many fully supervised learning methods for segmenting bioimages that can contain numerous object instances with thin separations. In this paper, we introduce a…

Computer Vision and Pattern Recognition · Computer Science 2020-09-11 Rihuan Ke , Aurélie Bugeau , Nicolas Papadakis , Peter Schuetz , Carola-Bibiane Schönlieb

Medical image segmentation is a fundamental and critical step in many image-guided clinical approaches. Recent success of deep learning-based segmentation methods usually relies on a large amount of labeled data, which is particularly…

Computer Vision and Pattern Recognition · Computer Science 2023-11-15 Rushi Jiao , Yichi Zhang , Le Ding , Rong Cai , Jicong Zhang

Polyp segmentation is a crucial step towards computer-aided diagnosis of colorectal cancer. However, most of the polyp segmentation methods require pixel-wise annotated datasets. Annotated datasets are tedious and time-consuming to produce,…

Computer Vision and Pattern Recognition · Computer Science 2022-11-23 Guangyu Ren , Michalis Lazarou , Jing Yuan , Tania Stathaki

This paper presents a new framework for human body part segmentation based on Deep Convolutional Neural Networks trained using only synthetic data. The proposed approach achieves cutting-edge results without the need of training the models…

Computer Vision and Pattern Recognition · Computer Science 2022-06-08 Alessandro Saviolo , Matteo Bonotto , Daniele Evangelista , Marco Imperoli , Jacopo Lazzaro , Emanuele Menegatti , Alberto Pretto

In visual recognition tasks, few-shot learning requires the ability to learn object categories with few support examples. Its re-popularity in light of the deep learning development is mainly in image classification. This work focuses on…

Computer Vision and Pattern Recognition · Computer Science 2022-07-29 Miao Zhang , Miaojing Shi , Li Li

Cell counting is a ubiquitous, yet tedious task that would greatly benefit from automation. From basic biological questions to clinical trials, cell counts provide key quantitative feedback that drive research. Unfortunately, cell counting…

Computer Vision and Pattern Recognition · Computer Science 2018-03-02 Carlos X. Hernández , Mohammad M. Sultan , Vijay S. Pande

As the complexity of neural network models has grown, it has become increasingly important to optimize their design automatically through metalearning. Methods for discovering hyperparameters, topologies, and learning rate schedules have…

Machine Learning · Computer Science 2020-04-28 Santiago Gonzalez , Risto Miikkulainen

We consider the problem of semantic image segmentation using deep convolutional neural networks. We propose a novel network architecture called the label refinement network that predicts segmentation labels in a coarse-to-fine fashion at…

Computer Vision and Pattern Recognition · Computer Science 2017-03-03 Md Amirul Islam , Shujon Naha , Mrigank Rochan , Neil Bruce , Yang Wang

Semantic segmentation is the task of classifying each pixel in an image. Training a segmentation model achieves best results using annotated images, where each pixel is annotated with the corresponding class. When obtaining fine annotations…

Computer Vision and Pattern Recognition · Computer Science 2025-10-20 Jort de Jong , Mike Holenderski