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A primary challenge in metagenomics is reconstructing individual microbial genomes from the mixture of short fragments created by sequencing. Recent work leverages the sparsity of the assembly graph to find $r$-dominating sets which enable…

Data Structures and Algorithms · Computer Science 2023-01-24 Yosuke Mizutani , Annie Staker , Blair D. Sullivan

In this paper we provide algorithms faster than O*(2^n) for several NP-complete domination-type problems. More precisely, we provide: an algorithm for CAPACITATED DOMINATING SET that solves it in O(1.89^n), a branch-and-reduce algorithm…

Data Structures and Algorithms · Computer Science 2009-09-23 Marek Cygan , Marcin Pilipczuk , Jakub Onufry Wojtaszczyk

A dominating set of a graph $\mathcal{G=(V, E)}$ is a subset of vertices $S\subseteq\mathcal{V}$ such that every vertex $v\in \mathcal{V} \setminus S$ outside the dominating set is adjacent to a vertex $u\in S$ within the set. The minimum…

Machine Learning · Computer Science 2023-06-07 Abihith Kothapalli , Mudassir Shabbir , Xenofon Koutsoukos

Assuming the Exponential Time Hypothesis (ETH), a result of Marx (ToC'10) implies that there is no $f(k)\cdot n^{o(k/\log k)}$ time algorithm that can solve 2-CSPs with $k$ constraints (over a domain of arbitrary large size $n$) for any…

Computational Complexity · Computer Science 2024-04-18 Karthik C. S. , Dániel Marx , Marcin Pilipczuk , Uéverton Souza

We study the classic {\sc Dominating Set} problem with respect to several prominent parameters. Specifically, we present algorithmic results that sidestep time complexity barriers by the incorporation of either approximation or larger…

Data Structures and Algorithms · Computer Science 2023-09-28 Ioannis Koutis , Michał Włodarczyk , Meirav Zehavi

In algorithmic graph theory, a classic open question is to determine the complexity of the Maximum Independent Set problem on $P_t$-free graphs, that is, on graphs not containing any induced path on $t$ vertices. So far, polynomial-time…

Data Structures and Algorithms · Computer Science 2018-04-12 Gábor Bacsó , Daniel Lokshtanov , Dániel Marx , Marcin Pilipczuk , Zsolt Tuza , Erik Jan van Leeuwen

De Berg et al. in [SICOMP 2020] gave an algorithmic framework for subexponential algorithms on geometric graphs with tight (up to ETH) running times. This framework is based on dynamic programming on graphs of weighted treewidth resulting…

Data Structures and Algorithms · Computer Science 2021-07-15 Fedor V. Fomin , Petr A. Golovach , Tanmay Inamdar , Saket Saurabh

We develop efficient parameterized, with additive error, approximation algorithms for the (Connected) $r$-Domination problem and the (Connected) $p$-Center problem for unweighted and undirected graphs. Given a graph $G$, we show how to…

Data Structures and Algorithms · Computer Science 2017-06-26 Arne Leitert , Feodor F. Dragan

Dominating set is a set of vertices of a graph such that all other vertices have a neighbour in the dominating set. We propose a new order-based randomised local search (RLS$_o$) algorithm to solve minimum dominating set problem in large…

Social and Information Networks · Computer Science 2017-11-06 David Chalupa

A long-standing open question is which graph class is the most general one permitting constant-time constant-factor approximations for dominating sets. The approximation ratio has been bounded by increasingly general parameters such as…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-26 Christoph Lenzen , Sophie Wenning

In this paper, we develop new tools and connections for exponential time approximation. In this setting, we are given a problem instance and a parameter $\alpha>1$, and the goal is to design an $\alpha$-approximation algorithm with the…

Data Structures and Algorithms · Computer Science 2017-08-14 Nikhil Bansal , Parinya Chalermsook , Bundit Laekhanukit , Danupon Nanongkai , Jesper Nederlof

Some of the most fundamental and well-studied graph parameters are the Diameter (the largest shortest paths distance) and Radius (the smallest distance for which a "center" node can reach all other nodes). The natural and important…

Data Structures and Algorithms · Computer Science 2019-04-29 Mina Dalirrooyfard , Virginia Vassilevska Williams , Nikhil Vyas , Nicole Wein

We study the classic set cover problem from the perspective of sub-linear algorithms. Given access to a collection of $m$ sets over $n$ elements in the query model, we show that sub-linear algorithms derived from existing techniques have…

Data Structures and Algorithms · Computer Science 2019-02-12 Piotr Indyk , Sepideh Mahabadi , Ronitt Rubinfeld , Ali Vakilian , Anak Yodpinyanee

In a graph $G$, a vertex subset $S\subseteq V(G)$ is said to be a dominating set of $G$ if every vertex not in $S$ is adjacent to a vertex in $S$. A dominating set $S$ of a graph $G$ is called a paired-dominating set if the induced subgraph…

Data Structures and Algorithms · Computer Science 2014-01-30 Ching-Chi Lin , Hai-Lun Tu

In this paper, we give approximation algorithms for the \textsc{Minimum Dominating Set (MDS)} problem on \emph{string} graphs and its subclasses. A \emph{path} is a simple curve made up of alternating horizontal and vertical line segments.…

Discrete Mathematics · Computer Science 2018-10-02 Dibyayan Chakraborty , Sandip Das , Joydeep Mukherjee

We show that there is a deterministic local algorithm (constant-time distributed graph algorithm) that finds a 5-approximation of a minimum dominating set on outerplanar graphs. We show there is no such algorithm that finds a…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-11-22 Marthe Bonamy , Linda Cook , Carla Groenland , Alexandra Wesolek

Dominating Set is a well-known combinatorial optimization problem which finds application in computational biology or mobile communication. Because of its $\mathrm{NP}$-hardness, one often turns to heuristics for good solutions. Many such…

Data Structures and Algorithms · Computer Science 2026-01-21 Hendrik Higl

A dominating set $S$ of graph $G$ is called an $r$-grouped dominating set if $S$ can be partitioned into $S_1,S_2,\ldots,S_k$ such that the size of each unit $S_i$ is $r$ and the subgraph of $G$ induced by $S_i$ is connected. The concept of…

Data Structures and Algorithms · Computer Science 2023-02-15 Tesshu Hanaka , Hirotaka Ono , Yota Otachi , Saeki Uda

Given a simple graph $G$ and an integer $k$, the goal of $k$-Clique problem is to decide if $G$ contains a complete subgraph of size $k$. We say an algorithm approximates $k$-Clique within a factor $g(k)$ if it can find a clique of size at…

Computational Complexity · Computer Science 2022-08-04 Bingkai Lin , Xuandi Ren , Yican Sun , Xiuhan Wang

We revisit $k$-Dominating Set, one of the first problems for which a tight $n^k-o(1)$ conditional lower bound (for $k\ge 3$), based on SETH, was shown (P\u{a}tra\c{s}cu and Williams, SODA 2007). However, the underlying reduction creates…

Data Structures and Algorithms · Computer Science 2023-12-25 Nick Fischer , Marvin Künnemann , Mirza Redzic
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