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We introduce two time-delay models of metabolic oscillations in yeast cells. Our model tests a hypothesis that the oscillations occur as multiple pathways share a limited resource which we equate to the number of available ribosomes. We…

Dynamical Systems · Mathematics 2023-12-07 Max M. Chumley , Firas A. Khasawneh , Andreas Otto , Tomas Gedeon

We here present two simplified models aimed at describing the long-term, irregular behaviours observed in the rheological response of certain complex fluids, such as periodic oscillations or chaotic-like variations. Both models exploit the…

Condensed Matter · Physics 2009-11-10 A. Aradian , M. E. Cates

We present a continuum model of the coupling between cells and substrate that accounts for some of the observed substrate-stiffness dependence of cell properties. The cell is modeled as an elastic active gel, adapting recently developed…

Cell Behavior · Quantitative Biology 2015-05-28 Shiladitya Banerjee , M. Cristina Marchetti

Macroscopic properties and shapes of biological tissues depend on the remodelling of cell-cell junctions at the microscopic scale. We propose a theoretical framework that couples a vertex model of solid confluent tissues with the dynamics…

Soft Condensed Matter · Physics 2020-12-02 Clement Zankoc , Matej Krajnc

Biomolecular oscillators can function robustly in the presence of environmental perturbations, which can either be static or dynamic. While the effect of different circuit parameters and mechanisms on the robustness to steady perturbations…

Molecular Networks · Quantitative Biology 2020-03-03 Soumyadip Banerjee , Shaunak Sen

The combined influence of oscillatory excitations and multiplicative stochastic perturbations of white noise type on isochronous systems in the plane is investigated. It is assumed that the intensity of perturbations decays with time and…

Dynamical Systems · Mathematics 2025-05-01 Oskar A. Sultanov

Linear stability of synchronized states in networks of delay-coupled oscillators depends on the type of interaction, the network and oscillator properties. For inert oscillator response, found ubiquitously from biology to engineering,…

Adaptation and Self-Organizing Systems · Physics 2022-02-02 Dimitrios Prousalis , Lucas Wetzel

The ubiquity of oscillations in epidemics presents a long standing challenge for the formulation of epidemic models. Whether they are external and seasonally driven, or arise from the intrinsic dynamics is an open problem. It is known that…

Populations and Evolution · Quantitative Biology 2011-09-06 S. Goncalves , G. Abramson , M. F. C. Gomes

Two different controlling methods are proposed to stabilize unstable continuous-sliding states of a dry-friction oscillator. Both methods are based on a delayed-feedback mechanism well-known for stabilizing periodic orbits in deterministic…

chao-dyn · Physics 2009-10-30 Franz-Josef Elmer

To produce sounds, we adjust the tension of our vocal folds to shape their properties and control the pitch. This efficient mechanism offers inspiration for designing reconfigurable materials and adaptable soft robots. However,…

Soft Condensed Matter · Physics 2025-06-18 Alexandre Delory , Daniel A. Kiefer , Maxime Lanoy , Antonin Eddi , Claire Prada , Fabrice Lemoult

Many natural and engineering systems involve the mixing of two fluid streams, in which the effects of density and viscosity gradients play important roles in determining flow stability. We perform linear stability calculations for a jet…

Fluid Dynamics · Physics 2023-02-08 Jinwei Yang , Vinod Srinivasan

The linear stability of viscous Keplerian flow around a gravitating center is studied using the rheological granular fluid model. The linear rheological instability triggered by the interplay of the shear rheology and Keplerian differential…

Earth and Planetary Astrophysics · Physics 2017-07-25 Luka G. Poniatowski , Alexander G. Tevzadze

We investigate the existence and stability of travelling wave solutions in a continuum field of non-locally coupled identical phase oscillators with distance-dependent propagation delays. A comprehensive stability diagram in the parametric…

Pattern Formation and Solitons · Physics 2011-12-13 Gautam C. Sethia , Abhijit Sen

In this work lipid ordering phase changes arising in planar membrane bilayers is investigated both accounting for elas- ticity alone and for effective viscoelastic response of such assemblies. The mechanical response of such membranes is…

Soft Condensed Matter · Physics 2015-10-16 L. Deseri , P. Pollaci , M. Zingales , K. Dayal

We use linear stability analysis and hybrid lattice Boltzmann simulations to study the dynamical behaviour of an active nematic confined in a channel made of viscoelastic material. We find that the quiescent, ordered active nematic is…

Soft Condensed Matter · Physics 2023-12-20 Francesco Mori , Saraswat Bhattacharyya , Julia M. Yeomans , Sumesh P. Thampi

Stability analysis is performed for a linear differential equation with two delays. Geometric arguments show that when the two delays are rationally dependent, then the region of stability increases. When the ratio has the form 1/n, this…

Dynamical Systems · Mathematics 2013-08-08 Joseph M. Mahaffy , Timothy C. Busken

This paper investigates the stability properties of a nonlinear fractional differential equation with two discrete delays and a delay-dependent coefficient. Such equations arise in various biological and control systems where temporal…

Dynamical Systems · Mathematics 2026-03-12 Pragati Dutta , Sachin Bhalekar

Many microorganisms propel through complex media by deformations of their flagella. The beat is thought to emerge from interactions between forces of the surrounding fluid, passive elastic response from deformations of the flagellum, and…

Fluid Dynamics · Physics 2024-01-23 Kathryn G. Link , Robert D. Guy , Becca Thomases , Paulo E. Arratia

Stability and boundedness analysis for vector nonlinear systems with variable delays and coefficients remains challenging due to the conservatism of existing methods. Moreover, estimates of the transient behavior of solution norms remain…

Dynamical Systems · Mathematics 2026-01-13 Mark A. Pinsky

Embryonic tissues deform across broad spatial and temporal scales and relax stress through active rearrangements. A quantitative link between cell-scale activity, spatial forcing, and emergent tissue-scale mechanics remains incomplete.…

Biological Physics · Physics 2025-12-18 Sahil Islam , Mohd. Suhail Rizvi , Anupam Gupta
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