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Finding a maximum clique in a given graph is one of the fundamental NP-hard problems. We compare two multi-core thread-parallel adaptations of a state-of-the-art branch and bound algorithm for the maximum clique problem, and provide a novel…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-09-05 Ciaran McCreesh , Patrick Prosser

The notion of bounded expansion captures uniform sparsity of graph classes and renders various algorithmic problems that are hard in general tractable. In particular, the model-checking problem for first-order logic is fixed-parameter…

Two kinds of approximation algorithms exist for the k-BALANCED PARTITIONING problem: those that are fast but compute unsatisfying approximation ratios, and those that guarantee high quality ratios but are slow. In this paper we prove that…

Computational Complexity · Computer Science 2019-04-29 Andreas Emil Feldmann

We identify a sufficient condition, treewidth-pliability, that gives a polynomial-time algorithm for an arbitrarily good approximation of the optimal value in a large class of Max-2-CSPs parameterised by the class of allowed constraint…

Discrete Mathematics · Computer Science 2024-01-04 Miguel Romero , Marcin Wrochna , Stanislav Živný

Tree containment problem is a fundamental problem in phylogenetic study, as it is used to verify a network model. It asks whether a given network contain a subtree that resembles a binary tree. The problem is NP-complete in general, even in…

Populations and Evolution · Quantitative Biology 2017-02-15 Andreas Gunawan

Bidimensionality is the most common technique to design subexponential-time parameterized algorithms on special classes of graphs, particularly planar graphs. The core engine behind it is a combinatorial lemma of Robertson, Seymour and…

Data Structures and Algorithms · Computer Science 2019-03-05 Fedor V. Fomin , Daniel Lokshtanov , Fahad Panolan , Saket Saurabh , Meirav Zehavi

Huynh, Joret, Micek, Seweryn, and Wollan (Combinatorica, 2022) introduced a graph parameter, later referred to as 2-treedepth and denoted $\mathrm{td}_2(\cdot)$. The parameter is the natural 2-connected version of treedepth. For every…

Combinatorics · Mathematics 2025-09-16 Jędrzej Hodor , Freddie Illingworth , Tomasz Mazur

In this work we study the interleaving distance between merge trees from a combinatorial point of view. We use a particular type of matching between trees to obtain a novel formulation of the distance. With such formulation, we tackle the…

Combinatorics · Mathematics 2024-11-11 Matteo Pegoraro

Shrub-depth and rank-depth are dense analogues of the tree-depth of a graph. It is well known that a graph has large tree-depth if and only if it has a long path as a subgraph. We prove an analogous statement for shrub-depth and rank-depth,…

Combinatorics · Mathematics 2022-10-05 O-joung Kwon , Rose McCarty , Sang-il Oum , Paul Wollan

In this article, we propose tree edit distance with variables, which is an extension of the tree edit distance to handle trees with variables and has a potential application to measuring the similarity between mathematical formulas,…

Data Structures and Algorithms · Computer Science 2021-05-12 Tatsuya Akutsu , Tomoya Mori , Naotoshi Nakamura , Satoshi Kozawa , Yuhei Ueno , Thomas N. Sato

In a graph G, a dissociation set is a subset of vertices which induces a subgraph with vertex degree at most 1. Finding a dissociation set of maximum cardinality in a graph is NP-hard even for bipartite graphs and is called the maximum…

Combinatorics · Mathematics 2021-08-02 Jianhua Tu , Lei Zhang , Junfeng Du , Rongling Lang

The bandwidth of a $n$-vertex graph $G$ is the smallest integer $b$ such that there exists a bijective function $f : V(G) \rightarrow \{1,...,n\}$, called a layout of $G$, such that for every edge $uv \in E(G)$, $|f(u) - f(v)| \leq b$. In…

Data Structures and Algorithms · Computer Science 2014-05-01 Markus Sortland Dregi , Daniel Lokshtanov

Phylogenetic trees and networks are leaf-labelled graphs that are used to describe evolutionary histories of species. The Tree Containment problem asks whether a given phylogenetic tree is embedded in a given phylogenetic network. Given a…

Populations and Evolution · Quantitative Biology 2010-06-17 Leo van Iersel , Charles Semple , Mike Steel

We give an algorithm that, given an $n$-vertex graph $G$ and an integer $k$, in time $2^{O(k)} n$ either outputs a tree decomposition of $G$ of width at most $2k + 1$ or determines that the treewidth of $G$ is larger than $k$. This is the…

Data Structures and Algorithms · Computer Science 2023-08-24 Tuukka Korhonen

Graph polynomials encode fundamental combinatorial invariants of graphs. Their computation is investigated using tree and path decomposition frameworks, with formal definitions of treewidth, k-trees, and pathwidth establishing the…

Discrete Mathematics · Computer Science 2025-09-29 Mehul Bafna , Shaghik Amirian

For an arbitrary tree we investigate the problems of constructing a maximum matching which minimizes or maximizes the cardinality of a maximum matching of the graph obtained from original one by its removal and present corresponding…

Discrete Mathematics · Computer Science 2007-07-17 R. R. Kamalian , V. V. Mkrtchyan

We introduce and investigate the approximability of the maximum binary tree problem (MBT) in directed and undirected graphs. The goal in MBT is to find a maximum-sized binary tree in a given graph. MBT is a natural variant of the…

Discrete Mathematics · Computer Science 2020-07-24 Karthekeyan Chandrasekaran , Elena Grigorescu , Gabriel Istrate , Shubhang Kulkarni , Young-San Lin , Minshen Zhu

Learning representations for query plans play a pivotal role in machine learning-based query optimizers of database management systems. To this end, particular model architectures are proposed in the literature to transform the…

Databases · Computer Science 2025-01-30 Baoming Chang , Amin Kamali , Verena Kantere

A $B$-tree is a type of search tree where every node (except possibly for the root) contains between $m$ and $2m$ keys for some positive integer $m$, and all leaves have the same distance to the root. We study sequences of $B$-trees that…

Combinatorics · Mathematics 2024-06-11 Fabian Burghart , Stephan Wagner

Graph editing problems offer an interesting perspective on sub- and supergraph identification problems for a large variety of target properties. They have also attracted significant attention in recent years, particularly in the area of…

Computational Complexity · Computer Science 2017-03-06 Luke Mathieson