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Mathematical models play an increasingly important role in the interpretation of biological experiments. Studies often present a model that generates the observations, connecting hypothesized process to an observed pattern. Such generative…

Populations and Evolution · Quantitative Biology 2014-06-18 Steven A. Frank

A linear structural equation model relates random variables of interest and corresponding Gaussian noise terms via a linear equation system. Each such model can be represented by a mixed graph in which directed edges encode the linear…

Statistics Theory · Mathematics 2012-10-04 Rina Foygel , Jan Draisma , Mathias Drton

Stochastic processes offer a flexible mathematical formalism to model and reason about systems. Most analysis tools, however, start from the premises that models are fully specified, so that any parameters controlling the system's dynamics…

Systems and Control · Computer Science 2017-01-11 Luca Bortolussi , Guido Sanguinetti

We develop a representation theory of categories as a means to explore characteristic structures in algebra. Characteristic structures play a critical role in isomorphism testing of groups and algebras, and their construction and…

Group Theory · Mathematics 2025-11-20 Peter A. Brooksbank , Heiko Dietrich , Joshua Maglione , E. A. O'Brien , James B. Wilson

This paper presents a novel method for structural data recognition using a large number of graph models. In general, prevalent methods for structural data recognition have two shortcomings: 1) Only a single model is used to capture…

Machine Learning · Computer Science 2020-04-15 Tomo Miyazaki , Shinichiro Omachi

Sensor-driven systems are increasingly ubiquitous: they provide both data and information that can facilitate real-time decision-making and autonomous actuation, as well as enabling informed policy choices by service providers and…

Software Engineering · Computer Science 2019-02-07 Muffy Calder , Simon Dobson , Michael Fisher , Julie McCann

How to integrate and verify spatial intelligence in foundation models remains an open challenge. Current practice often proxies Visual-Spatial Intelligence (VSI) with purely textual prompts and VQA-style scoring, which obscures geometry,…

Computer Vision and Pattern Recognition · Computer Science 2025-10-27 Guanlin Wu , Boyan Su , Yang Zhao , Pu Wang , Yichen Lin , Hao Frank Yang

Identifiability concerns finding which unknown parameters of a model can be estimated from given input-output data. If some subset of the parameters of a model cannot be determined given input-output data, then we say the model is…

Algebraic Geometry · Mathematics 2014-11-03 Nicolette Meshkat , Seth Sullivant , Marisa Eisenberg

A parameter of a mathematical model is structurally identifiable if it can be determined from noiseless experimental data. Here, we examine the identifiability properties of two important classes of linear compartmental models:…

Networks are widely used in the biological, physical, and social sciences as a concise mathematical representation of the topology of systems of interacting components. Understanding the structure of these networks is one of the outstanding…

Data Analysis, Statistics and Probability · Physics 2007-06-21 M. E. J. Newman , E. A. Leicht

Our ability to grasp and understand complex phenomena is essentially based on recognizing structures and relating these to each other. For example, any meteorological description of a weather condition and explanation of its evolution…

Atmospheric and Oceanic Physics · Physics 2021-12-17 Natalia Mikula , Tom Dörffel , Daniel Baum , Hans-Christian Hege

We show a data-driven approach to discover the underlying structural form of the mathematical equation governing the dynamics of multiple but similar systems induced by the same mechanisms. This approach hinges on theories that we lay out…

Neural and Evolutionary Computing · Computer Science 2019-08-29 Changwei Loh , Daniel Schneegass , Pengwei Tian

Statistical latent class models are widely used in social and psychological researches, yet it is often difficult to establish the identifiability of the model parameters. In this paper we consider the identifiability issue of a family of…

Methodology · Statistics 2016-03-15 Gongjun Xu

The performance of sparse matrix computation highly depends on the matching of the matrix format with the underlying structure of the data being computed on. Different sparse matrix formats are suitable for different structures of data.…

Numerical Analysis · Mathematics 2023-09-07 Khaled Abdelaal , Richard Veras

Perceptual similarity scores that align with human vision are critical for both training and evaluating computer vision models. Deep perceptual losses, such as LPIPS, achieve good alignment but rely on complex, highly non-linear…

Computer Vision and Pattern Recognition · Computer Science 2025-12-04 Paula Seidler , Neill D. F. Campbell , Ivor J A Simpson

The structural analysis of shape boundaries leads to the characterization of objects as well as to the understanding of shape properties. The literature on graphs and networks have contributed to the structural characterization of shapes…

Computer Vision and Pattern Recognition · Computer Science 2017-11-15 Gisele H. B. Miranda , Jeaneth Machicao , Odemir M. Bruno

Complex systems can be modelled at various levels of detail. Ideally, causal models of the same system should be consistent with one another in the sense that they agree in their predictions of the effects of interventions. We formalise…

In previous work, we introduced a method for modeling a configuration of objects in 2D and 3D images using a mathematical "medial/skeletal linking structure." In this paper, we show how these structures allow us to capture positional…

Computer Vision and Pattern Recognition · Computer Science 2017-06-02 James Damon , Ellen Gasparovic

Artificial General Intelligence (AGI) is closer than ever to becoming a reality, sparking widespread enthusiasm in the research community to collect and work with various modalities, including text, image, video, and audio. Despite recent…

Computer Vision and Pattern Recognition · Computer Science 2025-08-11 Mojtaba Valipour , Kelly Zheng , James Lowman , Spencer Szabados , Mike Gartner , Bobby Braswell

We develop a linear response framework for interpretability that treats a neural network as a Bayesian statistical mechanical system. A small perturbation of the data distribution, for example shifting the Pile toward GitHub or legal text,…

Machine Learning · Computer Science 2026-03-10 Garrett Baker , George Wang , Jesse Hoogland , Daniel Murfet