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Hierarchical clustering is a popular unsupervised data analysis method. For many real-world applications, we would like to exploit prior information about the data that imposes constraints on the clustering hierarchy, and is not captured by…

Data Structures and Algorithms · Computer Science 2018-07-17 Vaggos Chatziafratis , Rad Niazadeh , Moses Charikar

Affinity propagation is an exemplar-based clustering algorithm that finds a set of data-points that best exemplify the data, and associates each datapoint with one exemplar. We extend affinity propagation in a principled way to solve the…

Machine Learning · Computer Science 2012-02-20 Inmar Givoni , Clement Chung , Brendan J. Frey

The applicability of agglomerative clustering, for inferring both hierarchical and flat clustering, is limited by its scalability. Existing scalable hierarchical clustering methods sacrifice quality for speed and often lead to over-merging…

Clustering is a fundamental analysis tool aiming at classifying data points into groups based on their similarity or distance. It has found successful applications in all natural and social sciences, including biology, physics, economics,…

Information Retrieval · Computer Science 2021-02-24 Wen-Bo Xie , Yan-Li Lee , Cong Wang , Duan-Bing Chen , Tao Zhou

Hierarchical clustering is a critical task in numerous domains. Many approaches are based on heuristics and the properties of the resulting clusterings are studied post hoc. However, in several applications, there is a natural cost function…

Pattern comparison represents a fundamental and crucial aspect of scientific modeling, artificial intelligence, and pattern recognition. Three main approaches have typically been applied for pattern comparison: (i) distances; (ii)…

Physics and Society · Physics 2024-07-12 Alexandre Benatti , Luciano da F. Costa

The accelerated evolution and explosion of the Internet and social media is generating voluminous quantities of data (on zettabyte scales). Paramount amongst the desires to manipulate and extract actionable intelligence from vast big data…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-03-31 Dillon Mark Rose , Jean Michel Rouly , Rana Haber , Nenad Mijatovic , Adrian M. Peter

Hierarchical Clustering (HC) is a widely studied problem in exploratory data analysis, usually tackled by simple agglomerative procedures like average-linkage, single-linkage or complete-linkage. In this paper we focus on two objectives,…

Data Structures and Algorithms · Computer Science 2018-08-08 Moses Charikar , Vaggos Chatziafratis , Rad Niazadeh

Cluster analysis is one of the essential tasks in data mining and knowledge discovery. Each type of data poses unique challenges in achieving relatively efficient partitioning of the data into homogeneous groups. While the algorithms for…

Machine Learning · Computer Science 2018-12-11 Ruben A. Gevorgyan , Yenok B. Hakobyan

We propose a hierarchical correlation clustering method that extends the well-known correlation clustering to produce hierarchical clusters applicable to both positive and negative pairwise dissimilarities. Then, in the following, we study…

Machine Learning · Computer Science 2025-02-04 Morteza Haghir Chehreghani , Mostafa Haghir Chehreghani

The primary goal in cluster analysis is to discover natural groupings of objects. The field of cluster analysis is crowded with diverse methods that make special assumptions about data and address different scientific aims. Despite its…

Genomics · Quantitative Biology 2018-06-07 Gary K. Chen , Eric Chi , John Ranola , Kenneth Lange

We introduce two practical properties of hierarchical clustering methods for (possibly asymmetric) network data: excisiveness and linear scale preservation. The latter enforces imperviousness to change in units of measure whereas the former…

Machine Learning · Computer Science 2016-07-22 Gunnar Carlsson , Facundo Mémoli , Alejandro Ribeiro , Santiago Segarra

We address the classical problem of hierarchical clustering, but in a framework where one does not have access to a representation of the objects or their pairwise similarities. Instead, we assume that only a set of comparisons between…

Machine Learning · Statistics 2019-06-13 Debarghya Ghoshdastidar , Michaël Perrot , Ulrike von Luxburg

Hierarchical clustering (HC) is an important data analysis technique in which the goal is to recursively partition a dataset into a tree-like structure while grouping together similar data points at each level of granularity. Unfortunately,…

Data Structures and Algorithms · Computer Science 2025-06-09 Vladimir Braverman , Jon C. Ergun , Chen Wang , Samson Zhou

Hierarchical clustering is a recursive partitioning of a dataset into clusters at an increasingly finer granularity. Motivated by the fact that most work on hierarchical clustering was based on providing algorithms, rather than optimizing a…

Data Structures and Algorithms · Computer Science 2017-04-10 Vincent Cohen-Addad , Varun Kanade , Frederik Mallmann-Trenn , Claire Mathieu

In collaborative learning, multiple parties contribute their datasets to jointly deduce global machine learning models for numerous predictive tasks. Despite its efficacy, this learning paradigm fails to encompass critical application…

Cryptography and Security · Computer Science 2021-10-04 Xianrui Meng , Dimitrios Papadopoulos , Alina Oprea , Nikos Triandopoulos

We propose a nearest neighbor based clustering algorithm that results in a naturally defined hierarchy of clusters. In contrast to the agglomerative and divisive hierarchical clustering algorithms, our approach is not dependent on the…

Data Structures and Algorithms · Computer Science 2022-03-16 Kaan Gokcesu , Hakan Gokcesu

Recent works on Hierarchical Clustering (HC), a well-studied problem in exploratory data analysis, have focused on optimizing various objective functions for this problem under arbitrary similarity measures. In this paper we take the first…

Data Structures and Algorithms · Computer Science 2018-12-31 Moses Charikar , Vaggos Chatziafratis , Rad Niazadeh , Grigory Yaroslavtsev

Consensus clustering, a fundamental task in machine learning and data analysis, aims to aggregate multiple input clusterings of a dataset, potentially based on different non-sensitive attributes, into a single clustering that best…

Machine Learning · Computer Science 2025-06-18 Diptarka Chakraborty , Kushagra Chatterjee , Debarati Das , Tien Long Nguyen , Romina Nobahari

As the data size in Machine Learning fields grows exponentially, it is inevitable to accelerate the computation by utilizing the ever-growing large number of available cores provided by high-performance computing hardware. However, existing…

Machine Learning · Computer Science 2021-04-23 Kun Li , Liang Yuan , Yunquan Zhang , Gongwei Chen
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