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Predictive models with a focus on different spatial-temporal scales benefit governments and healthcare systems to combat the COVID-19 pandemic. Here we present the conditional Long Short-Term Memory networks with Quantile output…

Machine Learning · Computer Science 2020-11-24 HyeongChan Jo , Juhyun Kim , Tzu-Chen Huang , Yu-Li Ni

Traditionally, the identification of parameters in the formulation and solution of inverse problems considers that models, variables and mathematical parameters are free of uncertainties. This aspect simplifies the estimation process, but…

Populations and Evolution · Quantitative Biology 2020-06-02 Gustavo Barbosa Libotte , Fran Sérgio Lobato , Gustavo Mendes Platt

We propose a robust parameter estimation method for dynamical systems based on Statistical Learning techniques which aims to estimate a set of parameters that well fit the dynamics in order to obtain robust evidences about the qualitative…

Methodology · Statistics 2021-02-26 Diego Marcondes

In this paper, we develop a probabilistic mathematical model for the spread of coronavirus disease (COVID-19). It takes into account the known special characteristics of this disease such as the existence of infectious undetected cases and…

Populations and Evolution · Quantitative Biology 2020-08-10 Ayman Mourad , Fatima Mroue

Even in large systems, the effect of noise arising from when populations are initially small can persist to be measurable on the macroscale. A deterministic approximation to a stochastic model will fail to capture this effect, but it can be…

Populations and Evolution · Quantitative Biology 2024-08-13 Dylan Morris , John Maclean , Andrew J. Black

Spatio-temporal epidemic forecasting is critical for public health management, yet existing methods often struggle with insensitivity to weak epidemic signals, over-simplified spatial relations, and unstable parameter estimation. To address…

Machine Learning · Computer Science 2026-05-22 Sijie Ruan , Jinyu Li , Jia Wei , Zenghao Xu , Jie Bao , Junshi Xu , Junyang Qiu , Shuliang Wang , Xiaoxiao Wang , Hanning Yuan

The coronavirus pandemic has rapidly evolved into an unprecedented crisis. The susceptible-infectious-removed (SIR) model and its variants have been used for modeling the pandemic. However, time-independent parameters in the classical…

Populations and Evolution · Quantitative Biology 2020-09-09 Hyokyoung G. Hong , Yi Li

Several researches and evidence show the increasing likelihood of pandemics (large-scale outbreaks of infectious disease) which has far reaching sequels in all aspects of human lives ranging from rapid mortality rates to economic and social…

Machine Learning · Computer Science 2021-04-06 Shreya Ghosh , Anwesha Mukherjee , Soumya K Ghosh , Rajkumar Buyya

Mathematical modeling has been fundamental to achieving near real-time accurate forecasts of the spread of COVID-19. Similarly, the design of non-pharmaceutical interventions has played a key role in the application of policies to contain…

Physics and Society · Physics 2023-04-04 Jorge P. Rodríguez , Alberto Aleta , Yamir Moreno

Since the first coronavirus case was identified in the U.S. on Jan. 21, more than 1 million people in the U.S. have confirmed cases of COVID-19. This infectious respiratory disease has spread rapidly across more than 3000 counties and 50…

Machine Learning · Computer Science 2021-06-25 Shuang Li , Lu Wang , Xinyun Chen , Yixiang Fang , Yan Song

The outbreaks of Coronavirus Disease 2019 (COVID-19) have impacted the world significantly. Modeling the trend of infection and real-time forecasting of cases can help decision making and control of the disease spread. However, data-driven…

Populations and Evolution · Quantitative Biology 2020-09-18 Zhijian Li , Yunling Zheng , Jack Xin , Guofa Zhou

Social dynamics is concerned primarily with interactions among individuals and the resulting group behaviors, modeling the temporal evolution of social systems via the interactions of individuals within these systems. In particular, the…

Machine Learning · Statistics 2016-11-08 Zhen Xu , Wen Dong , Sargur Srihari

In response to the ongoing pandemic and health emergency of COVID-19, several models have been used to understand the dynamics of virus spread. Some employ mathematical models like the compartmental SEIHRD approach and others rely on…

Computational Geometry · Computer Science 2024-09-10 Raunak Sarbajna , Karima Elgarroussi , Hoang D Vo , Jianyuan Ni , Christoph F. Eick

Recently, the Centers for Disease Control and Prevention (CDC) has worked with other federal agencies to identify counties with increasing coronavirus disease 2019 (COVID-19) incidence (hotspots) and offers support to local health…

Machine Learning · Statistics 2022-05-04 Shixiang Zhu , Alexander Bukharin , Liyan Xie , Khurram Yamin , Shihao Yang , Pinar Keskinocak , Yao Xie

Many countries have experienced at least two waves of the COVID-19 pandemic. The second wave is far more dangerous as distinct strains appear more harmful to human health, but it stems from the complacency about the first wave. This paper…

Populations and Evolution · Quantitative Biology 2022-06-29 Edilson F. Arruda , Tarun Sharma , Rodrigo e A. Alexandre , Sinnu Susan Thomas

The spread of COVID-19 has coincided with the rise of Graph Neural Networks (GNNs), leading to several studies proposing their use to better forecast the evolution of the pandemic. Many such models also include Long Short Term Memory (LSTM)…

Machine Learning · Computer Science 2021-08-24 Nathan Sesti , Juan Jose Garau-Luis , Edward Crawley , Bruce Cameron

We present modeling of the COVID-19 epidemic in Illinois, USA, capturing the implementation of a Stay-at-Home order and scenarios for its eventual release. We use a non-Markovian age-of-infection model that is capable of handling long and…

Populations and Evolution · Quantitative Biology 2020-11-25 George N. Wong , Zachary J. Weiner , Alexei V. Tkachenko , Ahmed Elbanna , Sergei Maslov , Nigel Goldenfeld

Epidemiological models are best suitable to model an epidemic if the spread pattern is stationary. To deal with non-stationary patterns and multiple waves of an epidemic, we develop a hybrid model encompassing epidemic modeling, particle…

Machine Learning · Computer Science 2024-02-01 Naresh Kumar , Seba Susan

The unprecedented coronavirus disease 2019 (COVID-19) pandemic is still a worldwide threat to human life since its invasion into the daily lives of the public in the first several months of 2020. Predicting the size of confirmed cases is…

Applications · Statistics 2020-12-02 Xinyu Wang , Lu Yang , Hong Zhang , Zhouwang Yang , Catherine Liu

We apply topological data analysis, specifically the Mapper algorithm, to the U.S. COVID-19 data. The resulting Mapper graphs provide visualizations of the pandemic that are more complete than those supplied by other, more standard methods.…

Populations and Evolution · Quantitative Biology 2021-09-15 Yiran Chen , Ismar Volic
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