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Segmentation is a fundamental task in medical image analysis. The clinical interest is often to measure the volume of a structure. To evaluate and compare segmentation methods, the similarity between a segmentation and a predefined ground…

Image and Video Processing · Electrical Eng. & Systems 2020-10-09 Jeroen Bertels , David Robben , Dirk Vandermeulen , Paul Suetens

Clustering algorithms have significantly improved along with Deep Neural Networks which provide effective representation of data. Existing methods are built upon deep autoencoder and self-training process that leverages the distribution of…

Computer Vision and Pattern Recognition · Computer Science 2021-09-17 Xin Ma , Won Hwa Kim

Detecting predictive biomarkers from multi-omics data is important for precision medicine, to improve diagnostics of complex diseases and for better treatments. This needs substantial experimental efforts that are made difficult by the…

Quantitative Methods · Quantitative Biology 2021-06-08 Betül Güvenç Paltun , Samuel Kaski , Hiroshi Mamitsuka

Most existing deep learning-based frameworks for image segmentation assume that a unique ground truth is known and can be used for performance evaluation. This is true for many applications, but not all. Myocardial segmentation of…

Computer Vision and Pattern Recognition · Computer Science 2021-06-30 Dewen Zeng , Mingqi Li , Yukun Ding , Xiaowei Xu , Qiu Xie , Ruixue Xu , Hongwen Fei , Meiping Huang , Jian Zhuang , Yiyu Shi

Similarity-based clustering methods separate data into clusters according to the pairwise similarity between the data, and the pairwise similarity is crucial for their performance. In this paper, we propose {\em Clustering by Discriminative…

Machine Learning · Computer Science 2022-06-24 Yingzhen Yang , Ping Li

Deep clustering can optimize representations of instances (i.e., representation learning) and explore the inherent data distribution (i.e., clustering) simultaneously, which demonstrates a superior performance over conventional clustering…

Computer Vision and Pattern Recognition · Computer Science 2023-11-27 Qi Qian

Deep-learning techniques, particularly the transformer model, have shown great potential in enhancing the prediction performance of longitudinal health records. While previous methods have mainly focused on fixed-time risk prediction,…

Machine Learning · Computer Science 2024-05-03 Moshe Zisser , Dvir Aran

Multimodal data provides heterogeneous information for a holistic understanding of the tumor microenvironment. However, existing AI models often struggle to harness the rich information within multimodal data and extract poorly…

Machine Learning · Computer Science 2025-09-17 Huajun Zhou , Fengtao Zhou , Jiabo Ma , Yingxue Xu , Xi Wang , Xiuming Zhang , Li Liang , Zhenhui Li , Hao Chen

Whether class labels in a given data set correspond to meaningful clusters is crucial for the evaluation of clustering algorithms using real-world data sets. This property can be quantified by separability measures. The central aspects of…

Machine Learning · Statistics 2025-04-11 Jana Gauss , Fabian Scheipl , Moritz Herrmann

Early diagnosis of disease can lead to improved health outcomes, including higher survival rates and lower treatment costs. With the massive amount of information available in electronic health records (EHRs), there is great potential to…

Machine Learning · Computer Science 2022-08-02 Asem Alaa , Erik Mayer , Mauricio Barahona

A widely used paradigm to improve the generalization performance of high-capacity neural models is through the addition of auxiliary unsupervised tasks during supervised training. Tasks such as similarity matching and input reconstruction…

Machine Learning · Computer Science 2022-01-19 Shivin Srivastava , Kenji Kawaguchi , Vaibhav Rajan

Identifying mobility behaviors in rich trajectory data is of great economic and social interest to various applications including urban planning, marketing and intelligence. Existing work on trajectory clustering often relies on similarity…

Machine Learning · Computer Science 2020-03-04 Mingxuan Yue , Yaguang Li , Haoze Yang , Ritesh Ahuja , Yao-Yi Chiang , Cyrus Shahabi

The Dice score is widely used for binary segmentation due to its robustness to class imbalance. Soft generalisations of the Dice score allow it to be used as a loss function for training convolutional neural networks (CNN). Although CNNs…

Computer Vision and Pattern Recognition · Computer Science 2018-02-27 Lucas Fidon , Wenqi Li , Luis C. Garcia-Peraza-Herrera , Jinendra Ekanayake , Neil Kitchen , Sebastien Ourselin , Tom Vercauteren

Stroke is a common disabling neurological condition that affects about one-quarter of the adult population over age 25; more than half of patients still have poor outcomes, such as permanent functional dependence or even death, after the…

Computer Vision and Pattern Recognition · Computer Science 2024-02-19 Chia-Ling Tsai , Hui-Yun Su , Shen-Feng Sung , Wei-Yang Lin , Ying-Ying Su , Tzu-Hsien Yang , Man-Lin Mai

We present Mixture of Contrastive Experts (MiCE), a unified probabilistic clustering framework that simultaneously exploits the discriminative representations learned by contrastive learning and the semantic structures captured by a latent…

Machine Learning · Computer Science 2021-05-06 Tsung Wei Tsai , Chongxuan Li , Jun Zhu

Intracranial hemorrhage is a life-threatening disease, which requires fast medical intervention. Owing to the duration of data annotation, head CT images are usually available only with slice-level labeling. This paper presents a weakly…

Computer Vision and Pattern Recognition · Computer Science 2021-05-04 Jakub Nemcek , Tomas Vicar , Roman Jakubicek

Recently, there has been increasing interest to leverage the competence of neural networks to analyze data. In particular, new clustering methods that employ deep embeddings have been presented. In this paper, we depart from centroid-based…

Computer Vision and Pattern Recognition · Computer Science 2018-10-22 Sharon Fogel , Hadar Averbuch-Elor , Jacov Goldberger , Daniel Cohen-Or

Neural network-based clustering has recently gained popularity, and in particular a constrained clustering formulation has been proposed to perform transfer learning and image category discovery using deep learning. The core idea is to…

Computer Vision and Pattern Recognition · Computer Science 2018-06-29 Yen-Chang Hsu , Zhaoyang Lv , Joel Schlosser , Phillip Odom , Zsolt Kira

Pretraining models with unsupervised graph representation learning has led to significant advancements in domains such as social network analysis, molecular design, and electronic design automation (EDA). However, prior work in EDA has…

Machine Learning · Computer Science 2025-05-20 Sungyoung Lee , Ziyi Wang , Seunggeun Kim , Taekyun Lee , Yao Lai , David Z. Pan

Salient object detection increasingly receives attention as an important component or step in several pattern recognition and image processing tasks. Although a variety of powerful saliency models have been intensively proposed, they…

Computer Vision and Pattern Recognition · Computer Science 2016-11-18 Tianshui Chen , Liang Lin , Lingbo Liu , Xiaonan Luo , Xuelong Li
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