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Physics-informed machine learning (PIML) is emerging as a potentially transformative paradigm for modeling complex biomedical systems by integrating parameterized physical laws with data-driven methods. Here, we review three main classes of…

Machine Learning · Computer Science 2025-10-08 Nazanin Ahmadi , Qianying Cao , Jay D. Humphrey , George Em Karniadakis

High-stakes applications require AI-generated models to be interpretable. Current algorithms for the synthesis of potentially interpretable models rely on objectives or regularization terms that represent interpretability only coarsely…

Machine Learning · Computer Science 2021-04-28 Marco Virgolin , Andrea De Lorenzo , Francesca Randone , Eric Medvet , Mattias Wahde

We present Paicos, a new object-oriented Python package for analyzing simulations performed with Arepo. Paicos strives to reduce the learning curve for students and researchers getting started with Arepo simulations. As such, Paicos…

Instrumentation and Methods for Astrophysics · Physics 2024-04-24 Thomas Berlok , Léna Jlassi , Ewald Puchwein , Troels Haugbølle

PyOD is an open-source Python toolbox for performing scalable outlier detection on multivariate data. Uniquely, it provides access to a wide range of outlier detection algorithms, including established outlier ensembles and more recent…

Machine Learning · Computer Science 2019-06-12 Yue Zhao , Zain Nasrullah , Zheng Li

Partial differential equation (PDE) solvers underpin modern quantitative finance, governing option pricing and risk evaluation. Physics-Informed Neural Networks (PINNs) have emerged as a promising approach for solving the forward and…

Computational Engineering, Finance, and Science · Computer Science 2025-10-07 Akshay Govind Srinivasan , Anuj Jagannath Said , Sathwik Pentela , Vikas Dwivedi , Balaji Srinivasan

Three-dimensional topology optimization (TO) is a powerful technique in engineering design, but readily usable, open-source implementations remain limited within the popular Python scientific environment. This paper introduces PyTopo3D, a…

Graphics · Computer Science 2025-04-09 Jihoon Kim , Namwoo Kang

Clients often partner with AI experts to develop AI applications tailored to their needs. In these partnerships, careful planning and clear communication are critical, as inaccurate or incomplete specifications can result in misaligned…

Human-Computer Interaction · Computer Science 2024-05-28 Dae Hyun Kim , Hyungyu Shin , Shakhnozakhon Yadgarova , Jinho Son , Hariharan Subramonyam , Juho Kim

Information on protein-protein interactions (PPIs) not only advances our understanding of molecular biology but also provides important clues for target selection in drug discovery and the design of PPI inhibitors. One of the techniques…

Biomolecules · Quantitative Biology 2021-05-11 Masahito Ohue , Yutaka Akiyama

Understanding sustainability through modeling involves one of the complex and interdisciplinary activities where mathematics plays a key role. We provide arguments favoring the need for developing global models for measuring the status of…

Optimization and Control · Mathematics 2021-06-15 Arni S. R. Srinivasa Rao , Sireesh Saride

Physics-informed neural networks (PINNs) are an increasingly powerful way to solve partial differential equations, generate digital twins, and create neural surrogates of physical models. In this manuscript we detail the inner workings of…

The simulation and parameter optimization of coupled ocean circulation and ecosystem models in three space dimensions is one of the most challenging tasks in numerical climate research. Here we present a scientific toolkit that aims at…

Atmospheric and Oceanic Physics · Physics 2014-10-02 Jaroslaw Piwonski , Thomas Slawig

The integration of Artificial Intelligence (AI) into automation systems has the potential to enhance efficiency and to address currently unsolved existing technical challenges. However, the industry-wide adoption of AI is hindered by the…

Systems and Control · Electrical Eng. & Systems 2024-07-04 Marvin Schieseck , Philip Topalis , Lasse Reinpold , Felix Gehlhoff , Alexander Fay

The emergence of data-driven computational materials science offers unprecedented opportunities to explore complex material landscapes, complementing experimental research with the discovery of novel compounds. To enable these developments,…

Materials Science · Physics 2026-04-30 Holger-Dietrich Saßnick , Joshua Edzards , Timo Reents , Caterina Cocchi

PYROBOCOP is a lightweight Python-based package for control and optimization of robotic systems described by nonlinear Differential Algebraic Equations (DAEs). In particular, the package can handle systems with contacts that are described…

Robotics · Computer Science 2021-06-08 Arvind U. Raghunathan , Devesh K. Jha , Diego Romeres

Document processing automation remains a critical challenge in enterprise environments, where traditional manual approaches are labor-intensive and error-prone. We present MADP, a multi-agent architecture that addresses the challenge of…

Artificial Intelligence · Computer Science 2026-05-19 Diego Gosmar , Giovanni Zenezini

This paper introduces zonoLAB, a MATLAB-based toolbox for set-based control system analysis using the hybrid zonotope set representation. Hybrid zonotopes have proven to be an expressive set representation that can exactly represent the…

Systems and Control · Electrical Eng. & Systems 2024-06-11 Justin Koeln , Trevor J. Bird , Jacob Siefert , Justin Ruths , Herschel Pangborn , Neera Jain

Parallel application I/O performance often does not meet user expectations. Additionally, slight access pattern modifications may lead to significant changes in performance due to complex interactions between hardware and software. These…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-19 Julian M. Kunkel , Eugen Betke , Matt Bryson , Philip Carns , Rosemary Francis , Wolfgang Frings , Roland Laifer , Sandra Mendez

"Model-free control" and the corresponding "intelligent" PID controllers (iPIDs), which already had many successful concrete applications, are presented here for the first time in an unified manner, where the new advances are taken into…

Optimization and Control · Mathematics 2013-11-21 Michel Fliess , Cédric Join

Unmanned Aerial Vehicles (UAVs) have gained widespread recognition for their diverse applications, ranging from surveillance to delivery services. Among the various control algorithms employed to stabilize and navigate UAVs, the…

Robotics · Computer Science 2023-11-14 Hans Oersted , Yudong Ma

Developing and training deep learning models is expensive, so software engineers have begun to reuse pre-trained deep learning models (PTMs) and fine-tune them for downstream tasks. Despite the wide-spread use of PTMs, we know little about…

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