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In this paper we show how to find nearly optimal embeddings of large trees in several natural classes of graphs. The size of the tree T can be as large as a constant fraction of the size of the graph G, and the maximum degree of T can be…

Combinatorics · Mathematics 2007-07-17 Benny Sudakov , Jan Vondrak

Fitting distances to tree metrics and ultrametrics are two widely used methods in hierarchical clustering, primarily explored within the context of numerical taxonomy. Given a positive distance function…

Data Structures and Algorithms · Computer Science 2025-04-25 Amir Carmel , Debarati Das , Evangelos Kipouridis , Evangelos Pipis

Graph is a highly generic and diverse representation, suitable for almost any data processing problem. Spectral graph theory has been shown to provide powerful algorithms, backed by solid linear algebra theory. It thus can be extremely…

Computer Vision and Pattern Recognition · Computer Science 2023-04-20 Or Streicher , Ido Cohen , Guy Gilboa

We propose a hierarchical correlation clustering method that extends the well-known correlation clustering to produce hierarchical clusters applicable to both positive and negative pairwise dissimilarities. Then, in the following, we study…

Machine Learning · Computer Science 2025-02-04 Morteza Haghir Chehreghani , Mostafa Haghir Chehreghani

Learning embeddings from large-scale networks is an open challenge. Despite the overwhelming number of existing methods, is is unclear how to exploit network structure in a way that generalizes easily to unseen nodes, edges or graphs. In…

Machine Learning · Computer Science 2020-09-29 Nurudin Alvarez-Gonzalez , Andreas Kaltenbrunner , Vicenç Gómez

This paper presents new deterministic and distributed low-diameter decomposition algorithms for weighted graphs. In particular, we show that if one can efficiently compute approximate distances in a parallel or a distributed setting, one…

Data Structures and Algorithms · Computer Science 2022-09-07 Václav Rozhoň , Michael Elkin , Christoph Grunau , Bernhard Haeupler

$\newcommand{\eps}{\varepsilon}$ In this paper, we consider two important problems defined on finite metric spaces, and provide efficient new algorithms and approximation schemes for these problems on inputs given as graph shortest path…

Computational Geometry · Computer Science 2021-02-23 David Eppstein , Sariel Har-Peled , Anastasios Sidiropoulos

\begin{abstract} Greedy permutations, also known as Gonzalez Orderings or Farthest Point Traversals are a standard way to approximate $k$-center clustering and have many applications in sampling and approximating metric spaces. A greedy…

Computational Geometry · Computer Science 2024-12-04 Oliver Chubet , Don Sheehy , Siddharth Sheth

Embedding graphs in continous spaces is a key factor in designing and developing algorithms for automatic information extraction to be applied in diverse tasks (e.g., learning, inferring, predicting). The reliability of graph embeddings…

Machine Learning · Computer Science 2023-11-30 Andrea Marinoni , Pietro Lio' , Alessandro Barp , Christian Jutten , Mark Girolami

A \emph{binary tanglegram} is a drawing of a pair of rooted binary trees whose leaf sets are in one-to-one correspondence; matching leaves are connected by inter-tree edges. For applications, for example, in phylogenetics, it is essential…

Computational Geometry · Computer Science 2010-09-17 Kevin Buchin , Maike Buchin , Jaroslaw Byrka , Martin Nöllenburg , Yoshio Okamoto , Rodrigo I. Silveira , Alexander Wolff

Typical graph embeddings may not capture type-specific bipartite graph features that arise in such areas as recommender systems, data visualization, and drug discovery. Machine learning methods utilized in these applications would be better…

Machine Learning · Computer Science 2020-07-24 Justin Sybrandt , Ilya Safro

The central theorem of topological graph theory states that the graph minor relation is a well-quasi-order on graphs. It has far-reaching consequences, in particular in the study of graph structures and the design of (parameterized)…

Computational Geometry · Computer Science 2025-12-04 Corentin Lunel , Clément Maria

Subgraph detection has recently been one of the most studied problems in the CONGEST model of distributed computing. In this work, we study the distributed complexity of problems closely related to subgraph detection, mainly focusing on…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-12-08 Janne H. Korhonen , Amir Nikabadi

A map $\varphi:K\to R^2$ of a graph $K$ is approximable by embeddings, if for each $\varepsilon>0$ there is an $\varepsilon$-close to $\varphi$ embedding $f:K\to R^2$. Analogous notions were studied in computer science under the names of…

Geometric Topology · Mathematics 2018-10-02 Arkadiy Skopenkov

A significant portion of the data today, e.g, social networks, web connections, etc., can be modeled by graphs. A proper analysis of graphs with Machine Learning (ML) algorithms has the potential to yield far-reaching insights into many…

Social and Information Networks · Computer Science 2020-09-11 Taha Atahan Akyildiz , Amro Alabsi Aljundi , Kamer Kaya

Graph embedding has recently gained momentum in the research community, in particular after the introduction of random walk and neural network based approaches. However, most of the embedding approaches focus on representing the local…

Machine Learning · Computer Science 2020-02-19 Joerg Schloetterer , Martin Wehking , Fatemeh Salehi Rizi , Michael Granitzer

Graph representation learning is a ubiquitous task in machine learning where the goal is to embed each vertex into a low-dimensional vector space. We consider the bipartite graph and formalize its representation learning problem as a…

Machine Learning · Statistics 2020-03-03 Sen Na , Yuwei Luo , Zhuoran Yang , Zhaoran Wang , Mladen Kolar

Finding optimal matchings in dense graphs is of general interest and of particular importance in social, transportation and biological networks. While developing optimal solutions for various matching problems is important, the running…

Data Structures and Algorithms · Computer Science 2020-11-16 Nitish K. Panigrahy , Prithwish Basu , Don Towsley

Tutte's spring embedding theorem states that, for a three-connected planar graph, if the outer face of the graph is fixed as the complement of some convex region in the plane, and all other vertices are placed at the mass center of their…

Combinatorics · Mathematics 2020-07-10 John C. Urschel , Ludmil T. Zikatanov

The goal of metric learning is to learn a function that maps samples to a lower-dimensional space where similar samples lie closer than dissimilar ones. Particularly, deep metric learning utilizes neural networks to learn such a mapping.…

Computer Vision and Pattern Recognition · Computer Science 2021-06-14 Jenny Seidenschwarz , Ismail Elezi , Laura Leal-Taixé
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