Related papers: Improving reference mining in patents with BERT
The Bidirectional Encoder Representations from Transformers (BERT) model has been radically improving the performance of many Natural Language Processing (NLP) tasks such as Text Classification and Named Entity Recognition (NER)…
Natural language processing (NLP) of clinical trial documents can be useful in new trial design. Here we identify entity types relevant to clinical trial design and propose a framework called CT-BERT for information extraction from clinical…
Biomedical entity linking is the task of linking entity mentions in a biomedical document to referent entities in a knowledge base. Recently, many BERT-based models have been introduced for the task. While these models have achieved…
Extracting phenotypes from clinical text has been shown to be useful for a variety of clinical use cases such as identifying patients with rare diseases. However, reasoning with numerical values remains challenging for phenotyping in…
Lexicon information and pre-trained models, such as BERT, have been combined to explore Chinese sequence labelling tasks due to their respective strengths. However, existing methods solely fuse lexicon features via a shallow and random…
Recognition of biomedical entities from literature is a challenging research focus, which is the foundation for extracting a large amount of biomedical knowledge existing in unstructured texts into structured formats. Using the sequence…
With the development and business adoption of knowledge graph, there is an increasing demand for extracting entities and relations of knowledge graphs from unstructured domain documents. This makes the automatic knowledge extraction for…
Models based on bidirectional encoder representations from transformers (BERT) produce state of the art (SOTA) results on many natural language processing (NLP) tasks such as named entity recognition (NER), part-of-speech (POS) tagging etc.…
Various deep learning algorithms have been developed to analyze different types of clinical data including clinical text classification and extracting information from 'free text' and so on. However, automate the keyword extraction from the…
Pre-trained language models like BERT have achieved great success in a wide variety of NLP tasks, while the superior performance comes with high demand in computational resources, which hinders the application in low-latency IR systems. We…
Non-textual components such as charts, diagrams and tables provide key information in many scientific documents, but the lack of large labeled datasets has impeded the development of data-driven methods for scientific figure extraction. In…
Deep language models such as BERT pre-trained on large corpus have given a huge performance boost to the state-of-the-art information retrieval ranking systems. Knowledge embedded in such models allows them to pick up complex matching…
Until 2022, the US patent citation network contained almost 10 million patents and over 100 million citations. To overcome limitations in analyzing such complex networks, we propose a stochastic gradient relational event additive model…
The oxygen reduction reaction (ORR) catalyst plays a critical role in enhancing fuel cell efficiency, making it a key focus in material science research. However, extracting structured information about ORR catalysts from vast scientific…
Fine-tuning pre-trained models have achieved impressive performance on standard natural language processing benchmarks. However, the resultant model generalizability remains poorly understood. We do not know, for example, how excellent…
Prior work has demonstrated that question classification (QC), recognizing the problem domain of a question, can help answer it more accurately. However, developing strong QC algorithms has been hindered by the limited size and complexity…
Biomedical entity linking is the task of identifying mentions of biomedical concepts in text documents and mapping them to canonical entities in a target thesaurus. Recent advancements in entity linking using BERT-based models follow a…
Text plagiarism detection task is a common natural language processing task that aims to detect whether a given text contains plagiarism or copying from other texts. In existing research, detection of high level plagiarism is still a…
We present SpanBERT, a pre-training method that is designed to better represent and predict spans of text. Our approach extends BERT by (1) masking contiguous random spans, rather than random tokens, and (2) training the span boundary…
Valuing intangible assets under uncertainty remains a critical challenge in the strategic management of technological innovation due to the information asymmetry inherent in high-dimensional technical specifications. Traditional…