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In this paper we study codes for correcting deletable errors in binary words, where each bit is either retained, substituted, erased or deleted and the total number of errors is much smaller compared to the length of the codeword. We…

Information Theory · Computer Science 2021-03-02 Ghurumuruhan Ganesan

The binary string matching problem consists in finding all the occurrences of a pattern in a text where both strings are built on a binary alphabet. This is an interesting problem in computer science, since binary data are omnipresent in…

Data Structures and Algorithms · Computer Science 2008-10-15 Simone Faro , Thierry Lecroq

The string-matching field has grown at a such complicated stage that various issues come into play when studying it: data structure and algorithmic design, database principles, compression techniques, architectural features, cache and…

Data Structures and Algorithms · Computer Science 2008-01-16 Paolo Ferragina

Maximum run-length limited codes are constraint codes used in communication and data storage systems. Insertion/deletion correcting codes correct insertion or deletion errors caused in transmitted sequences and are used for combating…

Information Theory · Computer Science 2020-12-29 Reona Takemoto , Takayuki Nozaki

Data synchronization is a fundamental problem with applications in diverse fields such as cloud storage, genomics, and distributed systems. This paper addresses the challenge of synchronizing two files, one of which is a subsequence of the…

Information Theory · Computer Science 2025-12-09 Haolun , Ni , Lev Tauz , Ryan Gabrys , Lara Dolecek

String constraint solving refers to solving combinatorial problems involving constraints over string variables. String solving approaches have become popular over the last years given the massive use of strings in different application…

Artificial Intelligence · Computer Science 2021-07-01 Roberto Amadini

In this work, we introduce convolutional codes for network-error correction in the context of coherent network coding. We give a construction of convolutional codes that correct a given set of error patterns, as long as consecutive errors…

Information Theory · Computer Science 2009-08-06 K. Prasad , B. Sundar Rajan

We construct constant-sized ensembles of linear error-correcting codes over any fixed alphabet that can correct a given fraction of adversarial erasures at rates approaching the Singleton bound arbitrarily closely. We provide several…

Information Theory · Computer Science 2025-04-07 Yeyuan Chen , Mahdi Cheraghchi , Nikhil Shagrithaya

This work constructs codes that are efficiently decodable from a constant fraction of \emph{worst-case} insertion and deletion errors in three parameter settings: (i) Binary codes with rate approaching 1; (ii) Codes with constant rate for…

Information Theory · Computer Science 2016-05-17 Venkatesan Guruswami , Ray Li

We consider the problem of constructing codes that can correct $\delta$ deletions occurring in an arbitrary binary string of length $n$ bits. Varshamov-Tenengolts (VT) codes can correct all possible single deletions $(\delta=1)$ with an…

Information Theory · Computer Science 2017-05-01 Serge Kas Hanna , Salim El Rouayheb

A permutation code is a nonlinear code whose codewords are permutation of a set of symbols. We consider the use of permutation code in the deletion channel, and consider the symbol-invariant error model, meaning that the values of the…

Information Theory · Computer Science 2024-11-14 Minhan Gao , Kenneth W. Shum

We discuss how subspace codes can be used to simultaneously correct errors and erasures when the network performs random linear network coding and the edges are noisy channels. This is done by combining the subspace code with a classical…

Information Theory · Computer Science 2014-07-31 Olav Geil , Louise Foshammer , Malte Neve-Græsbøll

String edit distances have been used for decades in applications ranging from spelling correction and web search suggestions to DNA analysis. Most string edit distances are variations of the Levenshtein distance and consider only…

Genomics · Quantitative Biology 2022-05-12 Taylor Petty , Jan Hannig , Tunde I Huszar , Hari Iyer

This work continues the study of linear error correcting codes against adversarial insertion deletion errors (insdel errors). Previously, the work of Cheng, Guruswami, Haeupler, and Li \cite{CGHL21} showed the existence of asymptotically…

Information Theory · Computer Science 2023-03-31 Kuan Cheng , Zhengzhong Jin , Xin Li , Zhide Wei , Yu Zheng

Erasure coding techniques are getting integrated in networked distributed storage systems as a way to provide fault-tolerance at the cost of less storage overhead than traditional replication. Redundancy is maintained over time through…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-06-12 Lluis Pamies-Juarez , Frédérique Oggier , Anwitaman Datta

We consider the problem of constructing codes that can correct deletions that are localized within a certain part of the codeword that is unknown a priori. Namely, the model that we study is when at most $k$ deletions occur in a window of…

Information Theory · Computer Science 2021-05-07 Rawad Bitar , Serge Kas Hanna , Nikita Polyanskii , Ilya Vorobyev

Labeling of DNA molecules is a fundamental technique for DNA visualization and analysis. This process was mathematically modeled in [1], where the received sequence indicates the positions of the used labels. In this work, we develop error…

Information Theory · Computer Science 2025-11-04 Dganit Hanania , Eitan Yaakobi

This paper studies the cardinality of codes correcting insertions and deletions. We give improved upper and lower bounds on code size. Our upper bound is obtained by utilizing the asymmetric property of list decoding for insertions and…

Information Theory · Computer Science 2023-12-14 Kenji Yasunaga

In this paper, two moment balancing schemes, namely a variable index scheme and a fixed index scheme, for either single insertion/deletion error correction or multiple substitution error correction are introduced for coded sequences…

Information Theory · Computer Science 2019-01-24 Ling Cheng , Hendrik C. Ferreira

Locating the boundaries of consecutive blocks of quantum information is a fundamental building block for advanced quantum computation and quantum communication systems. We develop a coding theoretic method for properly locating boundaries…

Quantum Physics · Physics 2013-03-01 Yuichiro Fujiwara