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The ubiquity of machine learning, particularly deep learning, applied to graphs is evident in applications ranging from cheminformatics (drug discovery) and bioinformatics (protein interaction prediction) to knowledge graph-based query…

Databases · Computer Science 2025-02-04 Arijit Khan , Xiangyu Ke , Yinghui Wu

In recent years, Graph Neural Networks (GNNs) have made significant advances in processing structured data. However, most of them primarily adopted a model-centric approach, which simplifies graphs by converting them into undirected formats…

Machine Learning · Computer Science 2024-12-12 Henan Sun , Xunkai Li , Daohan Su , Junyi Han , Rong-Hua Li , Guoren Wang

Recently, graph neural networks have become a hot topic in machine learning community. This paper presents a Scopus based bibliometric overview of the GNNs research since 2004, when GNN papers were first published. The study aims to…

Machine Learning · Computer Science 2022-01-05 Abdalsamad Keramatfar , Mohadeseh Rafiee , Hossein Amirkhani

While social network analysis often focuses on graph structure of social actors, an increasing number of communication networks now provide textual content within social activity (email, instant messaging, blogging, collaboration networks).…

Information Retrieval · Computer Science 2010-11-01 Martine Hurault-Plantet , Elie Naulleau , Bernard Jacquemin

Graph embedding methods aim at finding useful graph representations by mapping nodes to a low-dimensional vector space. It is a task with important downstream applications, such as link prediction, graph reconstruction, data visualization,…

Machine Learning · Computer Science 2022-09-13 Said Kerrache , Hafida Benhidour

Embedding static graphs in low-dimensional vector spaces plays a key role in network analytics and inference, supporting applications like node classification, link prediction, and graph visualization. However, many real-world networks…

Machine Learning · Computer Science 2021-07-23 Claudio D. T. Barros , Matheus R. F. Mendonça , Alex B. Vieira , Artur Ziviani

Graph-structured data consisting of objects (i.e., nodes) and relationships among objects (i.e., edges) are ubiquitous. Graph-level learning is a matter of studying a collection of graphs instead of a single graph. Traditional graph-level…

Machine Learning · Computer Science 2022-06-01 Ge Zhang , Jia Wu , Jian Yang , Shan Xue , Wenbin Hu , Chuan Zhou , Hao Peng , Quan Z. Sheng , Charu Aggarwal

Graphs, and graph transformation systems, are used in many areas within Computer Science: to represent data structures and algorithms, to define computation models, as a general modelling tool to study complex systems, etc. Research in term…

Symbolic Computation · Computer Science 2021-02-04 Patrick Bahr

Massive network exploration is an important research direction with many applications. In such a setting, the network is, usually, modeled as a graph $G$, whereas any structural information of interest is extracted by inspecting the way…

Data Structures and Algorithms · Computer Science 2017-12-11 Panagiotis Strouthopoulos , Apostolos Papadopoulos

The Linked Data community is focused on integrating Resource Description Framework (RDF) data sets into a single unified representation known as the Web of Data. The Web of Data can be traversed by both man and machine and shows promise as…

Computers and Society · Computer Science 2009-03-03 Marko A. Rodriguez

Networks are a natural way of thinking about many datasets. The data on which a network is based, however, is rarely collected in a form that suits the analysis process, making it necessary to create and reshape networks. Data wrangling is…

Human-Computer Interaction · Computer Science 2019-07-23 Alex Bigelow , Carolina Nobre , Miriah Meyer , Alexander Lex

This study presents insights from interviews with nineteen Knowledge Graph (KG) practitioners who work in both enterprise and academic settings on a wide variety of use cases. Through this study, we identify critical challenges experienced…

Human-Computer Interaction · Computer Science 2024-06-19 Harry Li , Gabriel Appleby , Camelia Daniela Brumar , Remco Chang , Ashley Suh

Research on graph representation learning has received a lot of attention in recent years since many data in real-world applications come in form of graphs. High-dimensional graph data are often in irregular form, which makes them more…

Machine Learning · Computer Science 2020-06-03 Fenxiao Chen , Yuncheng Wang , Bin Wang , C. -C. Jay Kuo

Neural-symbolic computing has now become the subject of interest of both academic and industry research laboratories. Graph Neural Networks (GNN) have been widely used in relational and symbolic domains, with widespread application of GNNs…

Artificial Intelligence · Computer Science 2021-06-15 Luis C. Lamb , Artur Garcez , Marco Gori , Marcelo Prates , Pedro Avelar , Moshe Vardi

Control flow graphs (CFGs) are essential tools for understanding program behavior, yet the size of real-world CFGs makes them difficult to interpret. With thousands of nodes and edges, sophisticated graph drawing algorithms are required to…

Human-Computer Interaction · Computer Science 2025-11-10 Philipp Schaad , Tal Ben-Nun , Torsten Hoefler

Understanding the training dynamics of deep neural networks (DNNs) is important as it can lead to improved training efficiency and task performance. Recent works have demonstrated that representing the wirings of static graph cannot capture…

Machine Learning · Computer Science 2023-02-22 Fatemeh Vahedian , Ruiyu Li , Puja Trivedi , Di Jin , Danai Koutra

In this work, we introduce a new algorithm for analyzing a diagram, which contains visual and textual information in an abstract and integrated way. Whereas diagrams contain richer information compared with individual image-based or…

Computer Vision and Pattern Recognition · Computer Science 2017-11-28 Daesik Kim , Youngjoon Yoo , Jeesoo Kim , Sangkuk Lee , Nojun Kwak

Neural networks have been shown to be an effective tool for learning algorithms over graph-structured data. However, graph representation techniques---that convert graphs to real-valued vectors for use with neural networks---are still in…

Machine Learning · Computer Science 2018-10-10 Shaileshh Bojja Venkatakrishnan , Mohammad Alizadeh , Pramod Viswanath

Graph representation learning aims to effectively encode high-dimensional sparse graph-structured data into low-dimensional dense vectors, which is a fundamental task that has been widely studied in a range of fields, including machine…

In the context of modern machine learning, models deployed in real-world scenarios often encounter diverse data shifts like covariate and semantic shifts, leading to challenges in both out-of-distribution (OOD) generalization and detection.…

Machine Learning · Computer Science 2024-09-30 Han Wang , Yixuan Li
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