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We propose a scalable photonic architecture for implementation of feedforward and recurrent neural networks to perform the classification of handwritten digits from the MNIST database. Our experiment exploits off-the-shelf optical and…

Neural and Evolutionary Computing · Computer Science 2020-04-07 Piotr Antonik , Nicolas Marsal , Damien Rontani

Crystal-graph attention networks have emerged recently as remarkable tools for the prediction of thermodynamic stability and materials properties from unrelaxed crystal structures. Previous networks trained on two million materials…

We have created a knowledge graph based on major data sources used in ecotoxicological risk assessment. We have applied this knowledge graph to an important task in risk assessment, namely chemical effect prediction. We have evaluated nine…

Artificial Intelligence · Computer Science 2022-03-31 Erik B. Myklebust , Ernesto Jiménez-Ruiz , Jiaoyan Chen , Raoul Wolf , Knut Erik Tollefsen

Recommender systems now consume large-scale data and play a significant role in improving user experience. Graph Neural Networks (GNNs) have emerged as one of the most effective recommender system models because they model the rich…

Information Retrieval · Computer Science 2023-05-03 Yuening Wang , Yingxue Zhang , Antonios Valkanas , Ruiming Tang , Chen Ma , Jianye Hao , Mark Coates

Surfactants are key ingredients in foaming and cleansing products across various industries such as personal and home care, industrial cleaning, and more, with the critical micelle concentration (CMC) being of major interest. Predictive…

Due to the nature of deep learning approaches, it is inherently difficult to understand which aspects of a molecular graph drive the predictions of the network. As a mitigation strategy, we constrain certain weights in a multi-task graph…

Machine Learning · Computer Science 2020-11-25 Ryan Henderson , Djork-Arné Clevert , Floriane Montanari

Molecule property prediction has gained significant attention in recent years. The main bottleneck is the label insufficiency caused by expensive lab experiments. In order to alleviate this issue and to better leverage textual knowledge for…

Machine Learning · Computer Science 2023-10-24 Haiteng Zhao , Shengchao Liu , Chang Ma , Hannan Xu , Jie Fu , Zhi-Hong Deng , Lingpeng Kong , Qi Liu

Given the prevalence of large-scale graphs in real-world applications, the storage and time for training neural models have raised increasing concerns. To alleviate the concerns, we propose and study the problem of graph condensation for…

Machine Learning · Computer Science 2022-09-29 Wei Jin , Lingxiao Zhao , Shichang Zhang , Yozen Liu , Jiliang Tang , Neil Shah

The prediction of configurational disorder properties, such as configurational entropy and order-disorder phase transition temperature, of compound materials relies on efficient and accurate evaluations of configurational energies. Previous…

Materials Science · Physics 2024-01-31 Zhenyao Fang , Qimin Yan

In recent years, molecular representation learning has emerged as a key area of focus in various chemical tasks. However, many existing models fail to fully consider the geometric information of molecular structures, resulting in less…

Machine Learning · Computer Science 2023-06-29 Bumju Kwak , Jiwon Park , Taewon Kang , Jeonghee Jo , Byunghan Lee , Sungroh Yoon

Graph Neural Networks have demonstrated significant success in graph classification tasks, yet they often require substantial computational resources and struggle to capture global graph properties effectively. We introduce LightTopoGAT, a…

Machine Learning · Computer Science 2025-12-16 Ankit Sharma , Sayan Roy Gupta

Inferring properties of graph-structured data, e.g., the solubility of molecules, essentially involves learning the implicit mapping from graphs to their properties. This learning process is often costly for graph property learners like…

Machine Learning · Computer Science 2025-05-22 Chen Zhang , Weixin Bu , Zeyi Ren , Zhengwu Liu , Yik-Chung Wu , Ngai Wong

The recent success of graph neural networks has significantly boosted molecular property prediction, advancing activities such as drug discovery. The existing deep neural network methods usually require large training dataset for each…

Machine Learning · Computer Science 2021-02-17 Zhichun Guo , Chuxu Zhang , Wenhao Yu , John Herr , Olaf Wiest , Meng Jiang , Nitesh V. Chawla

Predicting the solubility of given molecules remains crucial in the pharmaceutical industry. In this study, we revisited this extensively studied topic, leveraging the capabilities of contemporary computing resources. We employed two…

Quantitative Methods · Quantitative Biology 2024-01-08 John Ho , Zhao-Heng Yin , Colin Zhang , Nicole Guo , Yang Ha

Understanding protein-metal interactions is central to structural biology, with metal ions being vital for catalysis, stability, and signal transduction. Predicting metal-binding residues and metal types remains challenging due to the…

Machine Learning · Computer Science 2026-02-23 Sayedmohammadreza Rastegari , Sina Tabakhi , Xianyuan Liu , Tianyi Jiang , Wei Sang , Haiping Lu

Parameterized quantum circuits (PQCs) are fundamental to quantum machine learning (QML), quantum optimization, and variational quantum algorithms (VQAs). The expressibility of PQCs is a measure that determines their capability to harness…

General circulation models (GCMs) typically have a grid size of 25--200 km. Parametrizations are used to represent diabatic processes such as radiative transfer and cloud microphysics and account for sub-grid-scale motions and variability.…

Atmospheric and Oceanic Physics · Physics 2019-10-23 Noah D Brenowitz , Christopher S Bretherton

At the intersection of computation and cognitive science, graph theory is utilized as a formalized description of complex relationships and structures. Traditional graph models are often static, lacking dynamic and autonomous behavioral…

Neurons and Cognition · Quantitative Biology 2024-06-11 Hui Wei , Chenyue Feng , Jianning Zhang

The storage capacity of the Hopfield model is about 15% of the network size. It can be increased significantly in the Potts-glass model of the associative memory only. In this model neurons can be in more than two different states. We show…

Disordered Systems and Neural Networks · Physics 2007-05-23 B. V. Kryzhanovsky , L. B. Litinskii , A. L. Mikaelyan

Key knowledge for steel-industry volatile organic compounds (VOCs) governance is scattered across unstructured scientific literature, making it difficult to integrate process, pollutant, and control-technology evidence and increasing the…

Artificial Intelligence · Computer Science 2026-05-27 Changqing Su , Yu Ding , Zuhong Lin , Hongyu Liu , Xi He , Zheng Zeng , Liqing Li