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Estimating the effective sample size (ESS) is fundamental in Bayesian phylogenetic inference to properly account for autocorrelation in MCMC samples. While methods for continuous parameters are well established, the discrete and…

Populations and Evolution · Quantitative Biology 2026-03-05 Jonathan Klawitter , Lars Berling , Jordan Douglas , Dong Xie , Alexei J. Drummond

This paper proposes a new method for finding the highest predictive density set or region, within the heteroscedastic regression framework. This framework enjoys the property that any highest predictive density set is a translation of some…

Methodology · Statistics 2025-04-09 Max Sampson , Kung-Sik Chan

Airborne laser scanning (LiDAR) point clouds over large forested areas can be processed to segment individual trees and subsequently extract tree-level information. Existing segmentation procedures typically detect more than 90% of…

Computer Vision and Pattern Recognition · Computer Science 2017-08-04 Hamid Hamraz , Marco A. Contreras , Jun Zhang

Devising indicative evaluation metrics for the image generation task remains an open problem. The most widely used metric for measuring the similarity between real and generated images has been the Fr\'echet Inception Distance (FID) score.…

Computer Vision and Pattern Recognition · Computer Science 2020-06-30 Muhammad Ferjad Naeem , Seong Joon Oh , Youngjung Uh , Yunjey Choi , Jaejun Yoo

We introduce a semiparametric approach to neighbor-based classification. We build off the recently proposed Boundary Trees algorithm by Mathy et al.(2015) which enables fast neighbor-based classification, regression and retrieval in large…

Machine Learning · Computer Science 2018-10-29 Tharindu Adikari , Stark C. Draper

This paper presents a brand new nonparametric density estimation strategy named the best-scored random forest density estimation whose effectiveness is supported by both solid theoretical analysis and significant experimental performance.…

Machine Learning · Statistics 2019-05-10 Hanyuan Hang , Hongwei Wen

Decision trees (DTs) embody interpretable classifiers. DTs have been advocated for deployment in high-risk applications, but also for explaining other complex classifiers. Nevertheless, recent work has demonstrated that predictions in DTs…

Artificial Intelligence · Computer Science 2022-05-20 Yacine Izza , Alexey Ignatiev , Nina Narodytska , Martin C. Cooper , Joao Marques-Silva

Conditional density estimation (CDE) goes beyond regression by modeling the full conditional distribution, providing a richer understanding of the data than just the conditional mean in regression. This makes CDE particularly useful in…

Machine Learning · Computer Science 2024-10-16 Lincen Yang , Matthijs van Leeuwen

We propose Partition Tree, a novel tree-based framework for conditional density estimation over general outcome spaces that supports both continuous and categorical variables within a unified formulation. Our approach models conditional…

Machine Learning · Computer Science 2026-05-13 Felipe Angelim , Alessandro Leite

Joint distributions over many variables are frequently modeled by decomposing them into products of simpler, lower-dimensional conditional distributions, such as in sparsely connected Bayesian networks. However, automatically learning such…

Machine Learning · Computer Science 2013-01-07 Scott Davies , Andrew Moore

Single-level density-based approach has long been widely acknowledged to be a conceptually and mathematically convincing clustering method. In this paper, we propose an algorithm called "best-scored clustering forest" that can obtain the…

Machine Learning · Statistics 2019-06-25 Hanyuan Hang , Yuchao Cai , Hanfang Yang

Tree ensembles, such as random forest and boosted trees, are renowned for their high prediction performance, whereas their interpretability is critically limited. In this paper, we propose a post processing method that improves the model…

Machine Learning · Statistics 2016-06-20 Satoshi Hara , Kohei Hayashi

Several structure-learning algorithms for staged trees, asymmetric extensions of Bayesian networks, have been proposed. However, these either do not scale efficiently as the number of variables considered increases, a priori restrict the…

Methodology · Statistics 2022-11-15 Peter Strong , Jim Q. Smith

Robust Bayesian inference using density power divergence (DPD) has emerged as a promising approach for handling outliers in statistical estimation. Although the DPD-based posterior offers theoretical guarantees of robustness, its practical…

Methodology · Statistics 2025-12-11 Naruki Sonobe , Tomotaka Momozaki , Tomoyuki Nakagawa

A new synthesis scheme is proposed to effectively generate a random vector with prescribed joint density that induces a (latent) Gaussian tree structure. The quality of synthesis is measured by total variation distance between the…

Information Theory · Computer Science 2017-05-09 Ali Moharrer , Shuangqing Wei , George T. Amariucai , Jing Deng

The estimation of probability densities based on available data is a central task in many statistical applications. Especially in the case of large ensembles with many samples or high-dimensional sample spaces, computationally efficient…

Methodology · Statistics 2017-05-04 Daniel W. Meyer

We give a highly efficient "semi-agnostic" algorithm for learning univariate probability distributions that are well approximated by piecewise polynomial density functions. Let $p$ be an arbitrary distribution over an interval $I$ which is…

Machine Learning · Computer Science 2013-05-15 Siu-On Chan , Ilias Diakonikolas , Rocco A. Servedio , Xiaorui Sun

We apply split conformal prediction techniques to regression problems with circular responses by introducing a suitable conformity score, leading to prediction sets with adaptive arc length and finite-sample coverage guarantees for any…

Machine Learning · Statistics 2024-12-30 Paulo C. Marques F. , Rinaldo Artes , Helton Graziadei

Recent theoretical work has demonstrated that Neighbor Joining applied to concatenated DNA sequences is a statistically consistent method of species tree reconstruction. This brief note compares the accuracy of this approach to other…

Populations and Evolution · Quantitative Biology 2016-12-07 Joseph Rusinko , Matthew McPartlon

In the density estimation model, the question of adaptive inference using P\'olya tree-type prior distributions is considered. A class of prior densities having a tree structure, called spike-and-slab P\'olya trees, is introduced. For this…

Statistics Theory · Mathematics 2020-09-18 Ismaël Castillo , Romain Mismer