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Related papers: Designs with complex blocking structures and netwo…

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There have been some major advances in the theory of optimal designs for interference models. However, the majority of them focus on one-dimensional layout of the block and the study for two-dimensional interference model is quite limited…

Methodology · Statistics 2017-05-24 A. S. Hedayat , Heng Xu , Wei Zheng

Given the ubiquity of modularity in biological systems, module-level regulation analysis is vital for understanding biological systems across various levels and their dynamics. Current statistical analysis on biological modules…

Methodology · Statistics 2025-03-24 Yaoming Zhen , Jin-Hong Du

Clustering is typically measured by the ratio of triangles to all triples, open or closed. Generating clustered networks, and how clustering affects dynamics on networks, is reasonably well understood for certain classes of networks…

Physics and Society · Physics 2014-10-22 Martin Ritchie , Luc Berthouze , Thomas House , Istvan Z. Kiss

In the past years, many computational methods have been developed to infer the structure of gene regulatory networks from time-series data. However, the applicability and accuracy presumptions of such algorithms remain unclear due to…

Molecular Networks · Quantitative Biology 2019-07-01 Laurent Mombaerts , Atte Aalto , Johan Markdahl , Jorge Goncalves

Complex networks often have a modular structure, where a number of tightly- connected groups of nodes (modules) have relatively few interconnections. Modularity had been shown to have an important effect on the evolution and stability of…

Physics and Society · Physics 2014-04-21 Saray Shai , Dror Y. Kenett , Yoed N. Kenett , Miriam Faust , Simon Dobson , Shlomo Havlin

Efforts to improve the adversarial robustness of convolutional neural networks have primarily focused on developing more effective adversarial training methods. In contrast, little attention was devoted to analyzing the role of…

Computer Vision and Pattern Recognition · Computer Science 2022-12-22 Shihua Huang , Zhichao Lu , Kalyanmoy Deb , Vishnu Naresh Boddeti

Inference of the network structure (e.g., routing topology) and dynamics (e.g., link performance) is an essential component in many network design and management tasks. In this paper we propose a new, general framework for analyzing and…

Networking and Internet Architecture · Computer Science 2019-11-13 Jian Ni , Sekhar Tatikonda

Studies of the effect of network structure on performance have, thus far, been restricted to examining ensembles of synthetic networks generated by canonical models from the Network Science literature, which do not plausibly represent real…

Physics and Society · Physics 2020-11-24 Steven J O'Hare , Richard D Connors , David P Watling

On-farm sensor data have allowed farmers to implement field management techniques and intensively track the corresponding responses. These data combined with historical records open the door for real-time field management improvements with…

Methodology · Statistics 2025-02-25 Sneha Jha , Yaguang Zhang , J. V. Krogmeier , D Buckmaster

Gradient networks can be used to model the dominant structure of complex networks. Previous works have focused on random gradient networks. Here we study gradient networks that minimize jamming on substrate networks with scale-free and…

Statistical Mechanics · Physics 2009-11-13 Natali Gulbahce

Biological systems are driven by intricate interactions among the complex array of molecules that comprise the cell. Many methods have been developed to reconstruct network models of those interactions. These methods often draw on large…

Molecular Networks · Quantitative Biology 2018-06-29 Marieke Lydia Kuijjer , Matthew Tung , GuoCheng Yuan , John Quackenbush , Kimberly Glass

This paper is concerned with the problem of designing distributed control protocols for network systems affected by delays and disturbances consisting of a first-order polynomial component and a residual signal. Specifically, we propose the…

Systems and Control · Electrical Eng. & Systems 2022-05-23 Shihao Xie , Giovanni Russo

Network datasets typically exhibit certain types of statistical dependencies, such as within-dyad correlation, row and column heterogeneity, and third-order dependence patterns such as transitivity and clustering. The first two of these can…

Methodology · Statistics 2018-07-24 Peter D. Hoff

In many experimental contexts, whether and how network interactions impact the outcome of interest for both treated and untreated individuals are key concerns. Networks data is often assumed to perfectly represent these possible…

Methodology · Statistics 2024-03-12 Morgan Hardy , Rachel M. Heath , Wesley Lee , Tyler H. McCormick

We are interested in the distribution of treatment effects for an experiment where units are randomized to a treatment but outcomes are measured for pairs of units. For example, we might measure risk sharing links between households…

Econometrics · Economics 2022-10-11 Eric Auerbach , Yong Cai

The biased net paradigm was the first general and empirically tractable scheme for parameterizing complex patterns of dependence in networks, expressing deviations from uniform random graph structure in terms of latent ``bias events,''…

Methodology · Statistics 2024-05-30 Carter T. Butts

In comparison to classical shallow representation learning techniques, deep neural networks have achieved superior performance in nearly every application benchmark. But despite their clear empirical advantages, it is still not well…

Machine Learning · Computer Science 2022-01-11 Calvin Murdock , George Cazenavette , Simon Lucey

Experiments in online platforms frequently suffer from network interference, in which a treatment applied to a given unit affects outcomes for other units connected via the platform. This SUTVA violation biases naive approaches to…

Social and Information Networks · Computer Science 2025-03-05 Tianyi Peng , Naimeng Ye , Andrew Zheng

A problem that arises in drawings of transportation networks is to minimize the number of crossings between different transportation lines. While this can be done efficiently under specific constraints, not all solutions are visually…

Data Structures and Algorithms · Computer Science 2013-06-25 Martin Fink , Sergey Pupyrev

Many natural systems are organized as networks, in which the nodes (be they cells, individuals or populations) interact in a time-dependent fashion. The dynamic behavior of these networks depends on how these nodes are connected, which can…

Neurons and Cognition · Quantitative Biology 2015-06-22 Anca Radulescu , Sergio Verduzco-Flores