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Persistence diagrams, combining geometry and topology for an effective shape description used in pattern recognition, have already proven to be an effective tool for shape representation with respect to a certainfiltering function.…

Algebraic Topology · Mathematics 2018-12-26 Alessia Angeli , Massimo Ferri , Ivan Tomba

Persistent homology of the Rips filtration allows to track topological features of a point cloud over scales, and is a foundational tool of topological data analysis. Unfortunately, the Rips-filtration is exponentially sized, when…

Computational Geometry · Computer Science 2018-07-27 Bernhard Brehm , Hanne Hardering

For nearly three decades, spatial games have produced a wealth of insights to the study of behavior and its relation to population structure. However, as different rules and factors are added or altered, the dynamics of spatial models often…

Computer Science and Game Theory · Computer Science 2021-09-30 Jakob Stenseke

Although random cell complexes occur throughout the physical sciences, there does not appear to be a standard way to quantify their statistical similarities and differences. The various proposals in the literature are usually motivated by…

Computational Geometry · Computer Science 2016-06-15 Benjamin Schweinhart , Jeremy Mason , Robert MacPherson

We use the topology of simplicial complexes to model political structures following [1]. Simplicial complexes are a natural tool to encode interactions in the structures since a simplex can be used to represent a subset of compatible…

Physics and Society · Physics 2021-12-07 Andrea Mock , Ismar Volic

Biological and physical systems often exhibit distinct structures at different spatial/temporal scales. Persistent homology is an algebraic tool that provides a mathematical framework for analyzing the multi-scale structures frequently…

Algebraic Topology · Mathematics 2016-02-01 Jonathan Jaquette , Miroslav Kramár

Multiparameter persistence module can capture more topological differences across data instances compared to using a single parameter, where the well-studied matching distance investigates the distance along a straight line in the…

Algebraic Topology · Mathematics 2025-08-01 Xudong Sun , René Corbet , Carsten Marr

Appropriately representing elements in a database so that queries may be accurately matched is a central task in information retrieval; recently, this has been achieved by embedding the graphical structure of the database into a manifold in…

Machine Learning · Statistics 2023-07-10 Yueqi Cao , Athanasios Vlontzos , Luca Schmidtke , Bernhard Kainz , Anthea Monod

This paper introduces persistent homology, which is a powerful tool to characterize the shape of data using the mathematical concept of topology. We explain the fundamental idea of persistent homology from scratch using some examples. We…

Algebraic Topology · Mathematics 2022-05-25 Ippei Obayashi , Takenobu Nakamura , Yasuaki Hiraoka

Computational models of complex systems are usually elaborate and sensitive to implementation details, characteristics which often affect their verification and validation. Model replication is a possible solution to this issue. It avoids…

Other Computer Science · Computer Science 2017-01-09 Nuno Fachada , Vitor V. Lopes , Rui C. Martins , Agostinho C. Rosa

The structure representation of data distribution plays an important role in understanding the underlying mechanism of generating data. In this paper, we propose nearest prime simplicial complex approaches (NSC) by utilizing persistent…

Machine Learning · Computer Science 2015-03-19 Junping Zhang , Ziyu Xie , Stan Z. Li

We propose a novel method of introducing structure into existing machine learning techniques by developing structure-based similarity and distance measures. To learn structural information, low-dimensional structure of the data is captured…

Machine Learning · Statistics 2011-10-27 Joseph Wang , Venkatesh Saligrama , David A. Castañón

Many practical applications in topological data analysis arise from data in the form of point clouds, which then yield simplicial complexes. The combinatorial structure of simplicial complexes captures the topological relationships between…

Algebraic Topology · Mathematics 2025-02-07 Nkechi Nnadi , Daniel Isaksen

Recent advances in self-supervised learning and neural network scaling have enabled the creation of large models, known as foundation models, which can be easily adapted to a wide range of downstream tasks. The current paradigm for…

Machine Learning · Computer Science 2024-01-09 Brandon Duderstadt , Hayden S. Helm , Carey E. Priebe

A suitable feature representation that can both preserve the data intrinsic information and reduce data complexity and dimensionality is key to the performance of machine learning models. Deeply rooted in algebraic topology, persistent…

Algebraic Topology · Mathematics 2018-11-02 Chi Seng Pun , Kelin Xia , Si Xian Lee

Characterizing the structural properties of neural networks is crucial yet poorly understood, and there are no well-established similarity measures between networks. In this work, we observe that neural networks can be represented as…

Machine Learning · Computer Science 2021-06-01 David Pérez-Fernández , Asier Gutiérrez-Fandiño , Jordi Armengol-Estapé , Marta Villegas

Persistent homology is a popular tool in Topological Data Analysis. It provides numerical characteristics of data sets which reflect global geometric properties. In order to be useful in practice, for example for feature generation in…

Computational Geometry · Computer Science 2020-02-17 Boris Goldfarb

We extend the persistence algorithm, viewed as an algorithm computing the homology of a complex of free persistence or graded modules, to complexes of modules that are not free. We replace persistence modules by their presentations and…

Algebraic Topology · Mathematics 2024-03-19 Tamal K. Dey , Florian Russold , Shreyas N. Samaga

This paper introduces a model that identifies spatial relationships for a structural analysis based on the concept of simplicial complex. The spatial relationships are identified through overlapping two map layers, namely a primary layer…

Data Analysis, Statistics and Probability · Physics 2008-01-15 Bin Jiang , Itzhak Omer

A general method for constructing simplicial complex from observed time series of dynamical systems based on the delay coordinate reconstruction procedure is presented. The obtained simplicial complex preserves all pertinent topological…

Chaotic Dynamics · Physics 2016-06-22 Slobodan Maletic , Yi Zhao , Milan Rajkovic