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Human populations have a complex history of introgression and of changing population size. Human genetic variation has been affected by both these processes, so that inference of past population size depends upon the pattern of gene flow…

Populations and Evolution · Quantitative Biology 2017-03-29 John Hawks

In this paper, we study a single-species population model with pulse toxicant input to a small polluted environment. The intrinsic rate of population is affected by environment and toxin in organisms. The toxin in organisms is influenced by…

Populations and Evolution · Quantitative Biology 2016-09-14 Li Dongmei , Yue Wu , Xu Yajing

To learn about the past from a sample of genomic sequences, one needs to understand how evolutionary processes shape genetic diversity. Most population genetic inference is based on frameworks assuming adaptive evolution is rare. But if…

Populations and Evolution · Quantitative Biology 2014-03-25 Richard A. Neher

We consider an exponentially growing population of cells undergoing mutations and ask about the effect of reproductive fluctuations (genetic drift) on its long-term evolution. We combine first step analysis with the stochastic dynamics of a…

Populations and Evolution · Quantitative Biology 2022-03-14 Arman Angaji , Christoph Velling , Johannes Berg

This paper concerns an age-structured juvenile-adult model with harvesting pulse and moving boundaries in a heterogeneous environment, in which the moving boundaries describe the natural expanding front of species and human periodic pulse…

Analysis of PDEs · Mathematics 2023-08-31 Haiyan Xu , Zhigui Lin , Huaiping Zhu

To study population dynamics, ecologists and wildlife biologists use relative abundance data, which are often subject to temporal preferential sampling. Temporal preferential sampling occurs when sampling effort varies across time. To…

Methodology · Statistics 2022-12-14 Michael R. Schwob , Mevin B. Hooten , Travis McDevitt-Galles

A biologically motivated individual-based framework for evolution in network-structured populations is developed that can accommodate eco-evolutionary dynamics. This framework is used to construct a network birth and death model. The…

Populations and Evolution · Quantitative Biology 2021-03-19 Karan Pattni , Christopher E. Overton , Kieran J. Sharkey

Evolution occurs in populations of reproducing individuals. It is well known that population structure can affect evolutionary dynamics. Traditionally, natural selection is studied between mutants that differ in reproductive rate, but are…

Populations and Evolution · Quantitative Biology 2021-11-23 Josef Tkadlec , Kamran Kaveh , Krishnendu Chatterjee , Martin A. Nowak

Evolutionary game dynamics in finite populations is typically subject to noise, inducing effects which are not present in deterministic systems, including fixation and extinction. In the first part of this paper we investigate the…

Populations and Evolution · Quantitative Biology 2010-06-16 Tobias Galla

While quite a few recent papers have explored game-resource feedback using the framework of evolutionary game theory, almost all the studies are confined to using time-continuous dynamical equations. Moreover, in such literature, the effect…

Populations and Evolution · Quantitative Biology 2024-01-24 Samrat Sohel Mondal , Avishuman Ray , Sagar Chakraborty

We study the influence of stochastic effects due to finite population size in the evolutionary dynamics of populations interacting in the multi-person Prisoner's Dilemma game. This paper is an extension of the investigation presented in a…

Populations and Evolution · Quantitative Biology 2007-05-23 Anders Eriksson , Kristian Lindgren

In traditional harvesting model a fishing effort E is defined by the fishing intensity and does not address the inverse effect of fish abundance on the fishing effort. In this paper, based on a canonical differential equation model, we…

Dynamical Systems · Mathematics 2007-05-23 Lev Idels , Mei Wang

Evolutionary branching is analysed in a stochastic, individual-based population model under mutation and selection. In such models, the common assumption is that individual reproduction and life career are characterised by values of a…

Populations and Evolution · Quantitative Biology 2025-10-01 S. Sagitov , B. Mehlig , P. Jagers , V. Vatutin

We have developed a mathematical model that captures stress-induced mutagenesis, a fundamental aspect of pathogenic and neoplastic evolutionary dynamics, on the fitness landscape with multiple relevant genetic traits as a high-dimensional…

Populations and Evolution · Quantitative Biology 2023-03-17 Kien T. Pham , Duc M. Nguyen , Duy V. Tran , Vi D. Ao , Huy D. Tran , Tuan K. Do , Trung V. Phan

In this paper, we investigate a delayed reaction-diffusion-advection equation, which models the population dynamics in the advective heterogeneous environment. The existence of the nonconstant positive steady state and associated Hopf…

Dynamical Systems · Mathematics 2018-07-23 Shanshan Chen , Junjie Wei , Xue Zhang

We present an individual based model of evolutionary ecology. The reproduction rate of individuals characterized by their genome depends on the composition of the population in genotype space. Ecological features such as the taxonomy and…

Statistical Mechanics · Physics 2016-08-31 Matt Hall , Kim Christensen , Simone A. di Collobiano , Henrik Jeldtoft Jensen

Many physical and natural systems, including the population of species, evolve in habitats with spatial stochastic variations of the individuals' motility. We study here the effect of those fluctuations on invasion and genetic loss. A…

Populations and Evolution · Quantitative Biology 2019-08-08 Youness Azimzade , Mahdi Sasar , Víctor M. Pérez García

Evolution has fascinated quantitative and physical scientists for decades: how can the random process of mutation, recombination, and duplication of genetic information generate the diversity of life? What determines the rate of evolution?…

Populations and Evolution · Quantitative Biology 2018-04-23 Richard A. Neher , Aleksandra M. Walczak

Bacteria and plankton populations living in oceans and lakes reproduce and die under the in- fluence of turbulent currents. Turbulent transport interacts in a complex way with the dynamics of populations because the typical reproduction…

Chaotic Dynamics · Physics 2011-09-20 Prasad Perlekar , Roberto Benzi , David R. Nelson , Federico Toschi

A discrete-time model of reacting evolving fields, transported by a bidimensional chaotic fluid flow, is studied. Our approach is based on the use of a Lagrangian scheme where {\it fluid particles} are advected by a $2d$ symplectic map…

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