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Nuclei segmentation is a fundamental task that is critical for various computational pathology applications including nuclei morphology analysis, cell type classification, and cancer grading. Conventional vision-based methods for nuclei…

Computer Vision and Pattern Recognition · Computer Science 2018-10-23 Faisal Mahmood , Daniel Borders , Richard Chen , Gregory N. McKay , Kevan J. Salimian , Alexander Baras , Nicholas J. Durr

In medicine, visualizing chromosomes is important for medical diagnostics, drug development, and biomedical research. Unfortunately, chromosomes often overlap and it is necessary to identify and distinguish between the overlapping…

Computer Vision and Pattern Recognition · Computer Science 2017-12-21 R. Lily Hu , Jeremy Karnowski , Ross Fadely , Jean-Patrick Pommier

We address the problem of segmenting 3D multi-modal medical images in scenarios where very few labeled examples are available for training. Leveraging the recent success of adversarial learning for semi-supervised segmentation, we propose a…

Computer Vision and Pattern Recognition · Computer Science 2018-10-30 Arnab Kumar Mondal , Jose Dolz , Christian Desrosiers

Chromosome recognition is an essential task in karyotyping, which plays a vital role in birth defect diagnosis and biomedical research. However, existing classification methods face significant challenges due to the inter-class similarity…

Computer Vision and Pattern Recognition · Computer Science 2023-12-14 Ruijia Chang , Suncheng Xiang , Chengyu Zhou , Kui Su , Dahong Qian , Jun Wang

Chromosome analysis and identification from metaphase images is a critical part of cytogenetics based medical diagnosis. It is mainly used for identifying constitutional, prenatal and acquired abnormalities in the diagnosis of genetic…

Computer Vision and Pattern Recognition · Computer Science 2022-09-13 Amritha S Pallavoor , Prajwal A , Sundareshan TS , Sreekanth K Pallavoor

A difficult step in the process of karyotyping is segmenting chromosomes that touch or overlap. In an attempt to automate the process, previous studies turned to Deep Learning methods, with some formulating the task as a semantic…

Machine Learning · Computer Science 2022-03-25 Daniel Kluvanec , Thomas B. Phillips , Kenneth J. W. McCaffrey , Noura Al Moubayed

Chromosome classification is an important but difficult and tedious task in karyotyping. Previous methods only classify manually segmented single chromosome, which is far from clinical practice. In this work, we propose a detection based…

Computer Vision and Pattern Recognition · Computer Science 2021-08-18 Chunlong Luo , Tianqi Yu , Yufan Luo , Manqing Wang , Fuhai Yu , Yinhao Li , Chan Tian , Jie Qiao , Li Xiao

This study introduces an innovative application of Conditional Generative Adversarial Networks (C-GAN) integrated with Stacked Hourglass Networks (SHGN) aimed at enhancing image segmentation, particularly in the challenging environment of…

Image and Video Processing · Electrical Eng. & Systems 2024-08-06 Haowei Yang , Yuxiang Hu , Shuyao He , Ting Xu , Jiajie Yuan , Xingxin Gu

Segmentation of skin lesions is considered as an important step in computer aided diagnosis (CAD) for automated melanoma diagnosis. In recent years, segmentation methods based on fully convolutional networks (FCN) have achieved great…

Computer Vision and Pattern Recognition · Computer Science 2018-08-01 Lei Bi , Dagan Feng , Jinman Kim

In medical imaging, the heterogeneity of multi-centre data impedes the applicability of deep learning-based methods and results in significant performance degradation when applying models in an unseen data domain, e.g. a new centreor a new…

Computer Vision and Pattern Recognition · Computer Science 2020-08-12 Hongwei Li , Timo Loehr , Anjany Sekuboyina , Jianguo Zhang , Benedikt Wiestler , Bjoern Menze

Microscopy images often suffer from high levels of noise, which can hinder further analysis and interpretation. Content-aware image restoration (CARE) methods have been proposed to address this issue, but they often require large amounts of…

Image and Video Processing · Electrical Eng. & Systems 2023-03-30 Felix Fuentes-Hurtado , Jean-Baptiste Sibarita , Virgile Viasnoff

Deep learning approaches based on convolutional neural networks (CNNs) have been successful in solving a number of problems in medical imaging, including image segmentation. In recent years, it has been shown that CNNs are vulnerable to…

Image and Video Processing · Electrical Eng. & Systems 2019-09-26 Liang Chen , Paul Bentley , Kensaku Mori , Kazunari Misawa , Michitaka Fujiwara , Daniel Rueckert

A fundamental task in human chromosome analysis is chromosome segmentation. Segmentation plays an important role in chromosome karyotyping. The first step in segmentation is to remove intrusive objects such as stain debris and other noises.…

Computer Vision and Pattern Recognition · Computer Science 2014-09-02 Shervin Minaee , Mehran Fotouhi , Babak Hossein Khalaj

Anomaly segmentation plays a pivotal role in identifying atypical objects in images, crucial for hazard detection in autonomous driving systems. While existing methods demonstrate noteworthy results on synthetic data, they often fail to…

Computer Vision and Pattern Recognition · Computer Science 2023-10-17 Ji Zhang , Xiao Wu , Zhi-Qi Cheng , Qi He , Wei Li

Organ at Risk (OAR) segmentation from CT scans is a key component of the radiotherapy treatment workflow. In recent years, deep learning techniques have shown remarkable potential in automating this process. In this paper, we investigate…

Image and Video Processing · Electrical Eng. & Systems 2023-09-21 Leonardo Crespi , Mattia Portanti , Daniele Loiacono

Mass segmentation is an important task in mammogram analysis, providing effective morphological features and regions of interest (ROI) for mass detection and classification. Inspired by the success of using deep convolutional features for…

Computer Vision and Pattern Recognition · Computer Science 2017-06-13 Wentao Zhu , Xiang Xiang , Trac D. Tran , Xiaohui Xie

Advances in deep-learning-based pipelines have led to breakthroughs in a variety of microscopy image diagnostics. However, a sufficiently big training data set is usually difficult to obtain due to high annotation costs. In the case of…

Image and Video Processing · Electrical Eng. & Systems 2021-09-21 Lukas Uzolas , Javier Rico , Pierrick Coupé , Juan C. SanMiguel , György Cserey

Federated learning enables collaborative training of machine learning models among different clients while ensuring data privacy, emerging as the mainstream for breaking data silos in the healthcare domain. However, the imbalance of medical…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 You Zhou , Lijiang Chen , Shuchang Lyu , Guangxia Cui , Wenpei Bai , Zheng Zhou , Meng Li , Guangliang Cheng , Huiyu Zhou , Qi Zhao

Many unsupervised visual anomaly detection methods train an auto-encoder to reconstruct normal samples and then leverage the reconstruction error map to detect and localize the anomalies. However, due to the powerful modeling and…

Computer Vision and Pattern Recognition · Computer Science 2024-12-18 Qingqing Fang , Qinliang Su , Wenxi Lv , Wenchao Xu , Jianxing Yu

Recent advances in computer-aided diagnosis for histopathology have been largely driven by the use of deep learning models for automated image analysis. While these networks can perform on par with medical experts, their performance can be…

Image and Video Processing · Electrical Eng. & Systems 2024-09-17 Frauke Wilm , Mathias Öttl , Marc Aubreville , Katharina Breininger
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