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Systems Biology has emerged in the last years as a new holistic approach based on the global understanding of cells instead of only being focused on their individual parts (genes or proteins), to better understand the complexity of human…

Kleene's computability theory based on his S1-S9 computation schemes constitutes a model for computing with objects of any finite type and extends Turing's `machine model' which formalises computing with real numbers. A fundamental…

Logic · Mathematics 2023-02-15 Sam Sanders

Bayesian mechanics provides a framework that addresses dynamical systems that can be conceptualised as Bayesian inference. However, elucidating the requisite generative models is essential for empirical applications to realistic…

Neurons and Cognition · Quantitative Biology 2024-12-02 Takuya Isomura

In many everyday categories (sets, spaces, modules, ...) objects can be both added and multiplied. The arithmetic of such objects is a challenge because there is usually no subtraction. We prove a family of cases of the following principle:…

Category Theory · Mathematics 2010-02-04 Marcelo Fiore , Tom Leinster

The term artificial implies an inherent dichotomy from the natural or organic. However, AI, as we know it, is a product of organic ingenuity: designed, implemented, and iteratively improved by human cognition. The very principles that…

Artificial Intelligence · Computer Science 2025-12-25 Prajwal Ghimire , Keyoumars Ashkan

The asynchronous systems are the non-deterministic models of the asynchronous circuits from the digital electrical engineering. In the autonomous version, such a system is a set of functions x:R{\to}{0,1}^{n} called states (R is the time…

Other Computer Science · Computer Science 2013-07-23 Serban E. Vlad

In the framework of certain general probability theories of single systems, we identify various nonclassical features such as incompatibility, multiple pure-state decomposability, measurement disturbance, no-cloning and the impossibility of…

Quantum Physics · Physics 2022-06-10 S. Aravinda , R. Srikanth , Anirban Pathak

The cells and tissues that make up our body juggle contradictory mechanical demands. It is crucial for their survival to be able to withstand large mechanical loads, but it is equally crucial for them to produce forces and actively change…

Biological Physics · Physics 2019-03-22 Federica Burla , Yuval Mulla , Bart E. Vos , Anders Aufderhorst-Roberts , Gijsje H. Koenderink

Assembly Theory (AT) is a theory that explains how to determine if a complex object is the product of evolution. Here we explain why attempts to compare AT to compression algorithms, ref 1, does not help identify if the object is the…

Information Theory · Computer Science 2024-03-28 Leroy Cronin

The fusion of humans and technology takes us into an unknown world described by some authors as populated by quasi living species that would relegate us - ordinary humans - to the rank of alienated agents emptied of our identity and…

Computers and Society · Computer Science 2017-11-06 Olivier Auber

The uncountability of the reals was first established by Cantor in what was later heralded as the first paper on set theory. Since the latter constitutes the official foundations of mathematics, the logical study of the uncountability of…

Logic · Mathematics 2026-04-10 Dag Normann , Sam Sanders

The Anthropic Principle has been with us since the 1970s. This Principle is advanced to account for the "fine tuning" of the 25 constants of the Standard Model of Particle Physics. Were these constants very different, life could not exist.…

History and Philosophy of Physics · Physics 2022-05-26 Stuart Kauffman

If we take the subjective character of consciousness seriously, consciousness becomes a matter of "being" rather than "doing". Because "doing" can be dissociated from "being", functional criteria alone are insufficient to decide whether a…

Neurons and Cognition · Quantitative Biology 2021-02-10 Larissa Albantakis , Giulio Tononi

The asynchronous systems are non-deterministic real time, binary valued models of the asynchronous circuits from electronics. Autonomy means that there is no input and regularity means analogies with the (real) dynamical systems. We…

Other Computer Science · Computer Science 2010-12-30 Serban E. Vlad

We propose a four-way classification of two-dimensional semi-totalistic cellular automata that is different than Wolfram's, based on two questions with yes-or-no answers: do there exist patterns that eventually escape any finite bounding…

Cellular Automata and Lattice Gases · Physics 2010-09-02 David Eppstein

The relational approach to quantum states asserts that the physical description of quantum systems is always relative to something or someone. In relational quantum mechanics (RQM) it is relative to other quantum systems, in the…

Quantum Physics · Physics 2021-07-09 Časlav Brukner

There is a lack of formalism for some key foundational concepts in systems engineering. One of the most recently acknowledged deficits is the inadequacy of systems engineering practices for engineering intelligent systems. In our previous…

Artificial Intelligence · Computer Science 2024-09-21 Niloofar Shadab , Tyler Cody , Alejandro Salado , Peter Beling

In complex systems, the interplay between nonlinear and stochastic dynamics, e.g., J. Monod's necessity and chance, gives rise to an evolutionary process in Darwinian sense, in terms of discrete jumps among attractors, with punctuated…

Adaptation and Self-Organizing Systems · Physics 2013-03-18 Hong Qian

Simonton (2006) makes the unwarranted assumption that nonmonotonicity supports a Darwinian view of creativity. Darwin's theory of natural selection was motivated by a paradox that has no equivalent in creative thought: the paradox of how…

Populations and Evolution · Quantitative Biology 2019-07-09 Liane Gabora

In his seminal paper on morphogenesis (1952), Alan Turing demonstrated that different spatio-temporal patterns can arise due to instability of the homogeneous state in reaction-diffusion systems, but at least two species are necessary to…

Formal Languages and Automata Theory · Computer Science 2014-06-03 Yuri Shalygo
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