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Biomedical named entity recognition (NER) is a fundamental task in text mining of medical documents and has many applications. Deep learning based approaches to this task have been gaining increasing attention in recent years as their…

Computation and Language · Computer Science 2018-08-16 Devendra Singh Sachan , Pengtao Xie , Mrinmaya Sachan , Eric P Xing

Although deep learning techniques have shown significant achievements, they frequently depend on extensive amounts of hand-labeled data and tend to perform inadequately in few-shot scenarios. The objective of this study is to devise a…

Computation and Language · Computer Science 2024-10-28 Leilei Su , Jian Chen , Yifan Peng , Cong Sun

We present a weakly-supervised data augmentation approach to improve Named Entity Recognition (NER) in a challenging domain: extracting biomedical entities (e.g., proteins) from the scientific literature. First, we train a neural NER (NNER)…

Machine Learning · Computer Science 2019-06-04 Joel Mathew , Shobeir Fakhraei , José Luis Ambite

Biomedical named entity recognition (NER) presents unique challenges due to specialized vocabularies, the sheer volume of entities, and the continuous emergence of novel entities. Traditional NER models, constrained by fixed taxonomies and…

Computation and Language · Computer Science 2025-05-22 Anthony Yazdani , Ihor Stepanov , Douglas Teodoro

Named Entity Recognition (NER) or the extraction of concepts from clinical text is the task of identifying entities in text and slotting them into categories such as problems, treatments, tests, clinical departments, occurrences (such as…

Computation and Language · Computer Science 2022-08-31 Namrata Nath , Sang-Heon Lee , Ivan Lee

Legal Entity Recognition (LER) is critical in automating legal workflows such as contract analysis, compliance monitoring, and litigation support. Existing approaches, including rule-based systems and classical machine learning models,…

Computation and Language · Computer Science 2025-07-18 Duraimurugan Rajamanickam

We present a bi-encoder framework for named entity recognition (NER), which applies contrastive learning to map candidate text spans and entity types into the same vector representation space. Prior work predominantly approaches NER as…

Computation and Language · Computer Science 2023-02-24 Sheng Zhang , Hao Cheng , Jianfeng Gao , Hoifung Poon

Zero-shot cross-lingual named entity recognition (NER) aims at transferring knowledge from annotated and rich-resource data in source languages to unlabeled and lean-resource data in target languages. Existing mainstream methods based on…

Computation and Language · Computer Science 2022-12-08 Jun-Yu Ma , Beiduo Chen , Jia-Chen Gu , Zhen-Hua Ling , Wu Guo , Quan Liu , Zhigang Chen , Cong Liu

State of the art Named Entity Recognition (NER) models have achieved an impressive ability to extract common phrases from text that belong to labels such as location, organization, time, and person. However, typical NER systems that rely on…

Computation and Language · Computer Science 2024-01-24 Alexandra Loessberg-Zahl

This paper presents a novel approach to accurately classify the hallmarks of cancer, which is a crucial task in cancer research. Our proposed method utilizes the Bidirectional Encoder Representations from Transformers (BERT) architecture,…

Computation and Language · Computer Science 2023-06-08 Sultan Zavrak , Seyhmus Yilmaz

Named entity recognition (NER) is the process of recognising and classifying important information (entities) in text. Proper nouns, such as a person's name, an organization's name, or a location's name, are examples of entities. The NER is…

Computation and Language · Computer Science 2023-02-28 Onkar Litake , Maithili Sabane , Parth Patil , Aparna Ranade , Raviraj Joshi

In the domain of Natural Language Processing (NLP), Named Entity Recognition (NER) stands out as a pivotal mechanism for extracting structured insights from unstructured text. This manuscript offers an exhaustive exploration into the…

Computation and Language · Computer Science 2023-09-26 Kalyani Pakhale

Named entity recognition (NER) models are typically based on the architecture of Bi-directional LSTM (BiLSTM). The constraints of sequential nature and the modeling of single input prevent the full utilization of global information from…

Computation and Language · Computer Science 2019-11-20 Ying Luo , Fengshun Xiao , Hai Zhao

Named entity recognition (NER) is a fundamental task in natural language processing that involves identifying and classifying entities in sentences into pre-defined types. It plays a crucial role in various research fields, including entity…

Computation and Language · Computer Science 2024-04-29 Dongsheng Wang , Xiaoqin Feng , Zeming Liu , Chuan Wang

Named entity recognition (NER) plays an important role in text-based information retrieval. In this paper, we combine Bidirectional Long Short-Term Memory (Bi-LSTM) \cite{hochreiter1997,schuster1997} with Conditional Random Field (CRF)…

Computation and Language · Computer Science 2019-12-04 Ngoc C. Lê , Ngoc-Yen Nguyen , Anh-Duong Trinh

Named entity recognition (NER) is frequently addressed as a sequence classification task where each input consists of one sentence of text. It is nevertheless clear that useful information for the task can often be found outside of the…

Computation and Language · Computer Science 2020-12-18 Jouni Luoma , Sampo Pyysalo

Named entity recognition (NER) is a fundamental component in many applications, such as Web Search and Voice Assistants. Although deep neural networks greatly improve the performance of NER, due to the requirement of large amounts of…

Computation and Language · Computer Science 2021-06-02 Shining Liang , Ming Gong , Jian Pei , Linjun Shou , Wanli Zuo , Xianglin Zuo , Daxin Jiang

Named entity recognition (NER) identifies typed entity mentions in raw text. While the task is well-established, there is no universally used tagset: often, datasets are annotated for use in downstream applications and accordingly only…

Computation and Language · Computer Science 2019-10-08 Xiao Huang , Li Dong , Elizabeth Boschee , Nanyun Peng

Named Entity Recognition is one of the most important text processing requirement in many NLP tasks. In this paper we use a deep architecture to accomplish the task of recognizing named entities in a given Hindi text sentence. Bidirectional…

Computation and Language · Computer Science 2019-11-06 Bansi Shah , Sunil Kumar Kopparapu

As a fundamental natural language processing task and one of core knowledge extraction techniques, named entity recognition (NER) is widely used to extract information from texts for downstream tasks. Nested NER is a branch of NER in which…

Computation and Language · Computer Science 2022-04-19 Yifei Yang , Zuchao Li , Hai Zhao