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We generalize the concept of ascending and descending runs from permutations to rooted labelled trees and mappings, i.e., functions from the set $\{1, \dots, n\}$ into itself. A combinatorial decomposition of the corresponding functional…

Combinatorics · Mathematics 2020-07-06 Marie-Louise Lackner , Alois Panholzer

The ongoing explosion of genome sequence data is transforming how we reconstruct and understand the histories of biological systems. Across biological scales, from individual cells to populations and species, trees-based models provide a…

Populations and Evolution · Quantitative Biology 2025-12-08 Yun Deng , Shing H. Zhan , Yulin Zhang , Chao Zhang , Bingjie Chen

We propose a principled method for autoencoding with random forests. Our strategy builds on foundational results from nonparametric statistics and spectral graph theory to learn a low-dimensional embedding of the model that optimally…

Machine Learning · Statistics 2026-01-16 Binh Duc Vu , Jan Kapar , Marvin Wright , David S. Watson

We show that counting Euler tours in undirected bounded tree-width graphs is tractable even in parallel - by proving a $\#SAC^1$ upper bound. This is in stark contrast to #P-completeness of the same problem in general graphs. Our main…

Computational Complexity · Computer Science 2015-12-15 Nikhil Balaji , Samir Datta , Venkatesh Ganesan

We consider the inference of the structure of an undirected graphical model in an exact Bayesian framework. More specifically we aim at achieving the inference with close-form posteriors, avoiding any sampling step. This task would be…

Machine Learning · Statistics 2017-05-02 Loïc Schwaller , Stéphane Robin , Michael Stumpf

In the present paper, we study algorithmic questions for the arc-intersection graph of directed paths on a tree. Such graphs are known to be perfect (proved by Monma and Wei in 1986). We present faster algorithms than all previously known…

Discrete Mathematics · Computer Science 2009-02-10 Olivier Durand de Gévigney , Frédéric Meunier , Christian Popa , Julien Reygner , Ayrin Romero

Spanning trees are an important primitive in many data analysis tasks, when a data set needs to be summarized in terms of its "skeleton", or when a tree-shaped graph over all observations is required for downstream processing. Popular…

Discrete Mathematics · Computer Science 2024-04-10 Enrique Fita Sanmartín , Christoph Schnörr , Fred A. Hamprecht

Tree convex sets refer to a collection of sets such that each set in the collection is a subtree of a tree whose nodes are the elements of these sets. They extend the concept of row convex sets each of which is an interval over a total…

Data Structures and Algorithms · Computer Science 2009-06-03 Yuanlin Zhang , Forrest Sheng Bao

We revisit the problem of enumeration of vertex-tricolored planar random triangulations solved in [Nucl. Phys. B 516 [FS] (1998) 543-587] in the light of recent combinatorial developments relating classical planar graph counting problems to…

Statistical Mechanics · Physics 2007-05-23 J. Bouttier , P. Di Francesco , E. Guitter

We derive tight bounds on the expected weights of several combinatorial optimization problems for random point sets of size $n$ distributed among the leaves of a balanced hierarchically separated tree. We consider {\it monochromatic} and…

Discrete Mathematics · Computer Science 2013-07-29 Béla Csaba , Thomas A. Plick , Ali Shokoufandeh

Regression trees and their ensemble methods are popular methods for nonparametric regression: they combine strong predictive performance with interpretable estimators. To improve their utility for locally smooth response surfaces, we study…

Methodology · Statistics 2021-09-13 Sören R. Künzel , Theo F. Saarinen , Edward W. Liu , Jasjeet S. Sekhon

A communication network can be modeled as a directed connected graph with edge weights that characterize performance metrics such as loss and delay. Network tomography aims to infer these edge weights from their pathwise versions measured…

Optimization and Control · Mathematics 2019-08-12 Mahmood Ettehad , Nick Duffield , Gregory Berkolaiko

Decision trees are widely used for non-linear modeling, as they capture interactions between predictors while producing inherently interpretable models. Despite their popularity, performing inference on the non-linear fit remains largely…

Methodology · Statistics 2026-04-14 Soham Bakshi , Snigdha Panigrahi

Tree graphs are routinely used in statistics. When estimating a Bayesian model with a tree component, sampling the posterior remains a core difficulty. Existing Markov chain Monte Carlo methods tend to rely on local moves, often leading to…

Methodology · Statistics 2025-02-05 Edric Tam , David B. Dunson , Leo L. Duan

In low-dimensional topology, many important decision algorithms are based on normal surface enumeration, which is a form of vertex enumeration over a high-dimensional and highly degenerate polytope. Because this enumeration is subject to…

Geometric Topology · Mathematics 2013-02-18 Benjamin A. Burton , Melih Ozlen

We define natural probability measures on cycle-rooted spanning forests (CRSFs) on graphs embedded on a surface with a Riemannian metric. These measures arise from the Laplacian determinant and depend on the choice of a unitary connection…

Probability · Mathematics 2017-04-06 Adrien Kassel , Richard Kenyon

This paper is concerned with distributed computation of several commonly used centrality measures in complex networks. In particular, we propose deterministic algorithms, which converge in finite time, for the distributed computation of the…

Systems and Control · Computer Science 2016-11-15 Keyou You , Roberto Tempo , Li Qiu

Classically, planning tasks are studied as a two-step process: plan creation and plan execution. In situations where plan creation is slow (for example, due to expensive information access or complex constraints), a natural speed-up tactic…

Data Structures and Algorithms · Computer Science 2025-02-17 Katrin Casel , Stefan Neubert

We study the problem of enumerating all rooted directed spanning trees (arborescences) of a directed graph (digraph) $G=(V,E)$ of $n$ vertices. An arborescence $A$ consisting of edges $e_1,\ldots,e_{n-1}$ can be represented as a monomial…

Data Structures and Algorithms · Computer Science 2024-08-06 Matúš Mihalák , Przemysław Uznański , Pencho Yordanov

We show that an algorithmic construction of sequences of recursive trees leads to a direct proof of the convergence of random recursive trees in an associated Doob-Martin compactification; it also gives a representation of the limit in…

Probability · Mathematics 2014-07-01 Rudolf Grübel , Igor Michailow