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In this paper, we investigate the computational complexity of subgraph reconfiguration problems in directed graphs. More specifically, we focus on the problem of reconfiguring arborescences in a digraph, where an arborescence is a directed…

Data Structures and Algorithms · Computer Science 2023-03-16 Takehiro Ito , Yuni Iwamasa , Yasuaki Kobayashi , Yu Nakahata , Yota Otachi , Kunihiro Wasa

Probabilistic distributions over spanning trees in directed graphs are a fundamental model of dependency structure in natural language processing, syntactic dependency trees. In NLP, dependency trees often have an additional root…

Computation and Language · Computer Science 2022-07-11 Ran Zmigrod , Tim Vieira , Ryan Cotterell

Color-constrained subgraph problems are those where we are given an edge-colored (directed or undirected) graph and the task is to find a specific type of subgraph, like a spanning tree, an arborescence, a single-source shortest path tree,…

Data Structures and Algorithms · Computer Science 2024-07-24 P. S. Ardra , Jasine Babu , Kritika Kashyap , R. Krithika , Sreejith K. Pallathumadam , Deepak Rajendraprasad

Most computational models of dependency syntax consist of distributions over spanning trees. However, the majority of dependency treebanks require that every valid dependency tree has a single edge coming out of the ROOT node, a constraint…

Computation and Language · Computer Science 2022-11-29 Miloš Stanojević

D. Wilson~\cite{[Wi]} in the 1990's described a simple and efficient algorithm based on loop-erased random walks to sample uniform spanning trees and more generally weighted trees or forests spanning a given graph. This algorithm provides a…

Probability · Mathematics 2018-08-29 L. Avena , F. Castell , A. Gaudilliere , C. Melot

We compare different methods for sampling from discrete probability distributions and introduce a new algorithm which is especially efficient on massively parallel processors, such as GPUs. The scheme preserves the distribution properties…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-09-02 Nikolaus Binder , Alexander Keller

This paper gives a new algorithm for sampling tree-weighted partitions of a large class of planar graphs. Formally, the tree-weighted distribution on $k$-partitions of a graph weights $k$-partitions proportional to the product of the number…

Data Structures and Algorithms · Computer Science 2026-05-08 Sarah Cannon , Topher Pankow , Wesley Pegden , Jamie Tucker-Foltz

Pairwise ordered tree alignment are combinatorial objects that appear in RNA secondary structure comparison. However, the usual representation of tree alignments as supertrees is ambiguous, i.e. two distinct supertrees may induce identical…

Quantitative Methods · Quantitative Biology 2016-03-08 Cedric Chauve , Julien Courtiel , Yann Ponty

In this article, Temperley's bijection between spanning trees of the square grid on the one hand, and perfect matchings (also known as dimer coverings) of the square grid on the other, is extended to the setting of general planar directed…

Combinatorics · Mathematics 2007-05-23 Richard W. Kenyon , James G. Propp , David B. Wilson

An arborescence, which is a directed analogue of a spanning tree in an undirected graph, is one of the most fundamental combinatorial objects in a digraph. In this paper, we study arborescences in digraphs from the viewpoint of…

Data Structures and Algorithms · Computer Science 2023-06-29 Takehiro Ito , Yuni Iwamasa , Naoyuki Kamiyama , Yasuaki Kobayashi , Yusuke Kobayashi , Shun-ichi Maezawa , Akira Suzuki

A rooted arborescence of a directed graph is a spanning tree directed towards a particular vertex. A recent work of Chepuri et al. showed that the arborescences of a covering graph of a directed graph G are closely related to the…

Combinatorics · Mathematics 2025-06-06 Muchen Ju , Junjie Ni , Kaixin Wang , Yihan Xiao

The junction-tree representation provides an attractive structural property for organizing a decomposable graph. In this study, we present two novel stochastic algorithms, which we call the junction-tree expander and junction-tree collapser…

Statistics Theory · Mathematics 2021-02-16 Jimmy Olsson , Tetyana Pavlenko , Felix L. Rios

Working with tree graphs is always easier than with loopy ones and spanning trees are the closest tree-like structures to a given graph. We find a correspondence between the solutions of random K-satisfiability problem and those of spanning…

Disordered Systems and Neural Networks · Physics 2009-11-11 A. Ramezanpour , S. Moghimi-Araghi

We investigate the problem of sequentially predicting the binary labels on the nodes of an arbitrary weighted graph. We show that, under a suitable parametrization of the problem, the optimal number of prediction mistakes can be…

Machine Learning · Computer Science 2012-12-27 Nicolo' Cesa-Bianchi , Claudio Gentile , Fabio Vitale , Giovanni Zappella

The classical matrix-tree theorem relates the determinant of the combinatorial Laplacian on a graph to the number of spanning trees. We generalize this result to Laplacians on one- and two-dimensional vector bundles, giving a combinatorial…

Probability · Mathematics 2011-12-09 Richard Kenyon

Given a length $n$ sample from $\mathbb{R}^d$ and a neural network with a fixed architecture with $W$ weights, $k$ neurons, linear threshold activation functions, and binary outputs on each neuron, we study the problem of uniformly sampling…

Machine Learning · Computer Science 2019-12-12 Changlong Wu , Narayana Prasad Santhanam

In this paper, we consider the problem of counting and sampling structures in graphs. We define a class of "edge universal labeling problems"---which include proper $k$-colorings, independent sets, and downsets---and describe simple…

Data Structures and Algorithms · Computer Science 2020-08-20 Christine T. Cheng , Will Rosenbaum

Neural Networks and Decision Trees: two popular techniques for supervised learning that are seemingly disconnected in their formulation and optimization method, have recently been combined in a single construct. The connection pivots on…

Machine Learning · Statistics 2020-02-27 Giuseppe Nuti , Lluís Antoni Jiménez Rugama , Kaspar Thommen

Various modifications of decision trees have been extensively used during the past years due to their high efficiency and interpretability. Tree node splitting based on relevant feature selection is a key step of decision tree learning, at…

Machine Learning · Computer Science 2017-09-05 Dmitry Ignatov , Andrey Ignatov

We consider the problem of enumeration of planar maps and revisit its one-matrix model solution in the light of recent combinatorial techniques involving conjugated trees. We adapt and generalize these techniques so as to give an…

Statistical Mechanics · Physics 2007-05-23 J. Bouttier , P. Di Francesco , E. Guitter
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