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We study the use of power weighted shortest path distance functions for clustering high dimensional Euclidean data, under the assumption that the data is drawn from a collection of disjoint low dimensional manifolds. We argue, theoretically…

Machine Learning · Computer Science 2019-09-05 Daniel Mckenzie , Steven Damelin

Persistence diagrams (PDs) play a key role in topological data analysis (TDA), in which they are routinely used to describe topological properties of complicated shapes. PDs enjoy strong stability properties and have proven their utility in…

Computational Geometry · Computer Science 2017-11-10 Mathieu Carrière , Marco Cuturi , Steve Oudot

We study the quality of weighted shortest paths when a continuous 2-dimensional space is discretized by a weighted triangular tessellation. In order to evaluate how well the tessellation approximates the 2-dimensional space, we study three…

Computational Geometry · Computer Science 2024-12-18 Prosenjit Bose , Guillermo Esteban , David Orden , Rodrigo I. Silveira

Persistence diagrams (PD)s play a central role in topological data analysis, and are used in an ever increasing variety of applications. The comparison of PD data requires computing comparison metrics among large sets of PDs, with metrics…

Computational Geometry · Computer Science 2024-02-23 Rolando Kindelan Nuñez , Mircea Petrache , Mauricio Cerda , Nancy Hitschfeld

Consider a weighted or unweighted k-nearest neighbor graph that has been built on n data points drawn randomly according to some density p on R^d. We study the convergence of the shortest path distance in such graphs as the sample size…

Machine Learning · Computer Science 2012-07-10 Morteza Alamgir , Ulrike von Luxburg

Diffusion models indirectly estimate the probability density over a data space, which can be used to study its structure. In this work, we show that geodesics can be computed in diffusion latent space, where the norm induced by the…

Computer Vision and Pattern Recognition · Computer Science 2025-05-08 Qingtao Yu , Jaskirat Singh , Zhaoyuan Yang , Peter Henry Tu , Jing Zhang , Hongdong Li , Richard Hartley , Dylan Campbell

Detailed network models of social, biological and other complex systems are often dense, which increases their computational complexity in simulations and analysis. To address this challenge, graph sparsification is used to remove edges…

Physics and Society · Physics 2026-03-19 Bernardo Pereira , Felipe Xavier Costa , Luís M. Rocha

Continuous 2-dimensional space is often discretized by considering a mesh of weighted cells. In this work we study how well a weighted mesh approximates the space, with respect to shortest paths. We consider a shortest path $…

Computational Geometry · Computer Science 2024-04-12 Prosenjit Bose , Guillermo Esteban , David Orden , Rodrigo I. Silveira

The shortest path problem is related to many dynamic processes on networks, ranging from routing in communication networks to signaling in molecular interaction networks. When the network is fully known, the shortest path problem can be…

Physics and Society · Physics 2026-02-05 Zhihao Qiu , Sámuel G. Balogh , Xinhan Liu , Piet Van Mieghem , Maksim Kitsak

What is the shortest path between two data points lying in a high-dimensional space? While the answer is trivial in Euclidean geometry, it becomes significantly more complex when the data lies on a curved manifold -- requiring a Riemannian…

Machine Learning · Computer Science 2025-11-04 Louis Béthune , David Vigouroux , Yilun Du , Rufin VanRullen , Thomas Serre , Victor Boutin

Manifolds discovered by machine learning models provide a compact representation of the underlying data. Geodesics on these manifolds define locally length-minimising curves and provide a notion of distance, which are key for reduced-order…

Machine Learning · Computer Science 2023-05-25 Daniel Kelshaw , Luca Magri

The geometry of generative models serves as the basis for interpolation, model inspection, and more. Unfortunately, most generative models lack a principal notion of geometry without restrictive assumptions on either the model or the data…

Machine Learning · Computer Science 2026-01-30 Frederik Möbius Rygaard , Shen Zhu , Yinzhu Jin , Søren Hauberg , Tom Fletcher

Persistence diagrams (PD)s play a central role in topological data analysis. This analysis requires computing distances among such diagrams such as the $1$-Wasserstein distance. Accurate computation of these PD distances for large data sets…

Computational Geometry · Computer Science 2025-05-13 Tamal K. Dey , Simon Zhang

Manifold hypothesis states that data points in high-dimensional space actually lie in close vicinity of a manifold of much lower dimension. In many cases this hypothesis was empirically verified and used to enhance unsupervised and…

Comparing two geometric graphs embedded in space is important in the field of transportation network analysis. Given street maps of the same city collected from different sources, researchers often need to know how and where they differ.…

Computational Geometry · Computer Science 2015-02-17 Mahmuda Ahmed , Brittany Terese Fasy , Kyle S. Hickmann , Carola Wenk

Density power divergence (DPD) is designed to robustly estimate the underlying distribution of observations, in the presence of outliers. However, DPD involves an integral of the power of the parametric density models to be estimated; the…

Methodology · Statistics 2024-02-09 Akifumi Okuno

The ability to represent and compare machine learning models is crucial in order to quantify subtle model changes, evaluate generative models, and gather insights on neural network architectures. Existing techniques for comparing data…

Many statistical and machine learning approaches rely on pairwise distances between data points. The choice of distance metric has a fundamental impact on performance of these procedures, raising questions about how to appropriately…

Statistics Theory · Mathematics 2020-04-20 Didong Li , David B Dunson

\v{C}ech Persistence diagrams (PDs) are topological descriptors routinely used to capture the geometry of complex datasets. They are commonly compared using the Wasserstein distances $OT_{p}$; however, the extent to which PDs are stable…

Computational Geometry · Computer Science 2024-07-15 Charles Arnal , David Cohen-Steiner , Vincent Divol

It has long been thought that high-dimensional data encountered in many practical machine learning tasks have low-dimensional structure, i.e., the manifold hypothesis holds. A natural question, thus, is to estimate the intrinsic dimension…

Machine Learning · Statistics 2022-06-01 Adam Block , Zeyu Jia , Yury Polyanskiy , Alexander Rakhlin
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