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One significant advantage of superconducting processors is their extensive design flexibility, which encompasses various types of qubits and interactions. Given the large number of tunable parameters of a processor, the ability to perform…

Quantum Physics · Physics 2025-04-25 Ziang Wang , Feng Wu , Hui-Hai Zhao , Xin Wan , Xiaotong Ni

LibBi is a software package for state-space modelling and Bayesian inference on modern computer hardware, including multi-core central processing units (CPUs), many-core graphics processing units (GPUs) and distributed-memory clusters of…

Computation · Statistics 2013-06-17 Lawrence M. Murray

Performant numerical solving of differential equations is required for large-scale scientific modeling. In this manuscript we focus on two questions: (1) how can researchers empirically verify theoretical advances and consistently compare…

Software Engineering · Computer Science 2018-07-18 Christopher Rackauckas , Qing Nie

Processing giga-pixel whole slide histopathology images (WSI) is a computationally expensive task. Multiple instance learning (MIL) has become the conventional approach to process WSIs, in which these images are split into smaller patches…

Computer Vision and Pattern Recognition · Computer Science 2023-07-06 Ramin Nakhli , Puria Azadi Moghadam , Haoyang Mi , Hossein Farahani , Alexander Baras , Blake Gilks , Ali Bashashati

Theoretical calculations Beyond the Standard Model (BSM) constitute a challenge for high energy physicists, but are necessary when searching for New Physics. The predictions of a BSM scenario need to be compared with experimental data and…

High Energy Physics - Phenomenology · Physics 2021-02-23 G. Uhlrich , F. Mahmoudi , A. Arbey

Automatic modulation classification (AMC) is an essential technique for noncooperative spectrum monitoring and intelligent wireless receivers. However, practical AMC models must identify modulation formats from short and noisy I/Q…

Signal Processing · Electrical Eng. & Systems 2026-05-26 Ruixiang Zhang , Zinan Zhou , Yezhuo Zhang , Guangyu Li , Xuanpeng Li

Memristive in-memory computing (IMC) has emerged as a promising solution for addressing the bottleneck in the Von Neumann architecture. However, the couplingbetweenthecircuitandalgorithm in IMC makes computing reliability susceptible to…

Hardware Architecture · Computer Science 2025-11-24 Houji Zhou , Ling Yang , Zhiwei Zhou , Yi Li , Xiangshui Miao

Machine learning interatomic potentials (MLIPs) enable atomistic simulations with near ab initio accuracy at significantly reduced computational cost, but their broader adoption is often limited by fragmented tooling, limited scalability,…

Molecular dynamics simulations use statistical mechanics at the atomistic scale to enable both the elucidation of fundamental mechanisms and the engineering of matter for desired tasks. The behavior of molecular systems at the microscale is…

Computational Physics · Physics 2020-12-25 Wujie Wang , Simon Axelrod , Rafael Gómez-Bombarelli

Automatic Modulation Classification (AMC) is a signal processing technique widely used at the physical layer of wireless systems to enhance spectrum utilization efficiency. In this work, we propose a fast and accurate AMC system, termed…

Signal Processing · Electrical Eng. & Systems 2025-04-14 Faheem Ur Rehman , Qamar Abbas , M. Karam Shehzad

The discovery of causal relationships from high-dimensional data is a major open problem in bioinformatics. Machine learning and feature attribution models have shown great promise in this context but lack causal interpretation. Here, we…

Machine Learning · Computer Science 2023-04-26 Payam Dibaeinia , Saurabh Sinha

Automatic differentiation represents a paradigm shift in scientific programming, where evaluating both functions and their derivatives is required for most applications. By removing the need to explicitly derive expressions for gradients,…

Chemical Physics · Physics 2022-06-29 Muhammad F. Kasim , Susi Lehtola , Sam M. Vinko

This paper introduces PolyDiM, an open-source C++ library tailored for the development and implementation of polytopal discretization methods for partial differential equations. The library provides robust and modular tools to support…

Numerical Analysis · Mathematics 2025-05-21 Stefano Berrone , Andrea Borio , Gioana Teora , Fabio Vicini

Optimization of beamlines and lattices is a common problem in accelerator physics, which is usually solved with semi-analytical methods and numerical optimization routines. However, these are usually of the gradient-free or…

Accelerator Physics · Physics 2025-07-14 Francisco Huhn , Francesco M. Velotti

In the evolution of 6th Generation (6G) technology, the emergence of cell-free networking presents a paradigm shift, revolutionizing user experiences within densely deployed networks where distributed access points collaborate. However, the…

Signal Processing · Electrical Eng. & Systems 2024-08-15 Dieter Verbruggen , Hazem Sallouha , Sofie Pollin

Non-adiabatic molecular dynamics (NAMD) simulations have become an indispensable tool for investigating excited-state dynamics in solids. In this work, we propose a general framework, N$^2$AMD which employs an E(3)-equivariant deep neural…

The `equation-free toolbox' empowers the computer-assisted analysis of complex, multiscale systems. Its aim is to enable you to immediately use microscopic simulators to perform macro-scale system level tasks and analysis, because…

Mathematical Software · Computer Science 2020-04-08 John Maclean , J. E. Bunder , A. J. Roberts

The Imaging Computational Microscope (ICM) is a suite of computational tools for automated analysis of functional imaging data that runs under the cross-platform MATLAB environment (The Mathworks, Inc.). ICM uses a semi-supervised…

Neurons and Cognition · Quantitative Biology 2015-02-26 E. Paxon Frady , William B. Kristan

Mathematical modeling and simulation is a promising approach to personalized cancer medicine. Yet, the complexity, heterogeneity and multi-scale nature of cancer pose significant computational challenges. Coupling discrete cell-based models…

Quantitative Methods · Quantitative Biology 2021-11-23 Xiaoran Lai , Håkon A. Taskén , Torgeir Mo , Simon W. Funke , Arnoldo Frigessi , Marie E. Rognes , Alvaro Köhn-Luque

PiML (read $\pi$-ML, /`pai`em`el/) is an integrated and open-access Python toolbox for interpretable machine learning model development and model diagnostics. It is designed with machine learning workflows in both low-code and high-code…

Machine Learning · Computer Science 2023-12-21 Agus Sudjianto , Aijun Zhang , Zebin Yang , Yu Su , Ningzhou Zeng