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Signed graphs are powerful models for representing complex relations with both positive and negative connections. Recently, Signed Graph Neural Networks (SGNNs) have emerged as potent tools for analyzing such graphs. To our knowledge, no…

Machine Learning · Computer Science 2024-11-28 Zeyu Zhang , Lu Li , Xingyu Ji , Kaiqi Zhao , Xiaofeng Zhu , Philip S. Yu , Jiawei Li , Maojun Wang

Program similarity is a fundamental concept, central to the solution of software engineering tasks such as software plagiarism, clone identification, code refactoring and code search. Accurate similarity estimation between programs requires…

Machine Learning · Computer Science 2020-07-31 Aravind Nair , Avijit Roy , Karl Meinke

Persistent topological Laplacians are operators that provide persistent Betti numbers and additional multiscale geometric information through the eigenvalues of the persistent topological Laplacian matrix. We introduce a framework and novel…

Algebraic Topology · Mathematics 2026-03-04 Benjamin Jones , Guo-Wei Wei

Pre-trained Language Models (PLMs) have the potential to transform software development tasks. However, despite significant advances, current PLMs struggle to capture the structured and relational attributes of code, such as control flow…

Software Engineering · Computer Science 2026-05-06 Mert Tiftikci , Amir Molzam Sharifloo , Mira Mezini

Temporal graph learning is pivotal for deciphering dynamic systems, where the core challenge lies in explicitly modeling the underlying evolving patterns that govern network transformation. However, prevailing methods are predominantly…

Machine Learning · Computer Science 2026-02-20 Yijun Ma , Zehong Wang , Weixiang Sun , Yanfang Ye

Graph Neural Networks (GNNs) are powerful deep learning models to generate node embeddings on graphs. When applying deep GNNs on large graphs, it is still challenging to perform training in an efficient and scalable way. We propose a novel…

Machine Learning · Computer Science 2020-10-08 Hanqing Zeng , Hongkuan Zhou , Ajitesh Srivastava , Rajgopal Kannan , Viktor Prasanna

Recently, a large number of data sources opened up by informatization intensify the data heterogeneity, the faster speed of data generation and the gradual implementation of data regulations limit the storage time of data. In personalized…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-03 Sixing Tan , Xianmin Liu

Integrating native AI support into the network architecture is an essential objective of 6G. Federated Learning (FL) emerges as a potential paradigm, facilitating decentralized AI model training across a diverse range of devices under the…

Networking and Internet Architecture · Computer Science 2023-09-29 Wenxuan Ye , Chendi Qian , Xueli An , Xueqiang Yan , Georg Carle

In many real-world network datasets such as co-authorship, co-citation, email communication, etc., relationships are complex and go beyond pairwise. Hypergraphs provide a flexible and natural modeling tool to model such complex…

Machine Learning · Computer Science 2019-05-23 Naganand Yadati , Madhav Nimishakavi , Prateek Yadav , Vikram Nitin , Anand Louis , Partha Talukdar

In this paper we introduce TWIG (Topologically-Weighted Intelligence Generation), a novel, embedding-free paradigm for simulating the output of KGEs that uses a tiny fraction of the parameters. TWIG learns weights from inputs that consist…

Artificial Intelligence · Computer Science 2024-02-12 Jeffrey Sardina , John D. Kelleher , Declan O'Sullivan

Both graph structures and textual information play a critical role in Knowledge Graph Completion (KGC). With the success of Pre-trained Language Models (PLMs) such as BERT, they have been applied for text encoding for KGC. However, the…

Computation and Language · Computer Science 2025-01-06 Yuxia Geng , Jiaoyan Chen , Yuhang Zeng , Zhuo Chen , Wen Zhang , Jeff Z. Pan , Yuxiang Wang , Xiaoliang Xu

While sparse coding-based clustering methods have shown to be successful, their bottlenecks in both efficiency and scalability limit the practical usage. In recent years, deep learning has been proved to be a highly effective, efficient and…

Machine Learning · Computer Science 2015-10-19 Zhangyang Wang , Shiyu Chang , Jiayu Zhou , Meng Wang , Thomas S. Huang

Recent studies of federated graph foundational models (FedGFMs) break the idealized and untenable assumption of having centralized data storage to train graph foundation models, and accommodate the reality of distributed, privacy-restricted…

Machine Learning · Computer Science 2026-01-30 Yinlin Zhu , Di Wu , Xianzhi Zhang , Yuming Ai , Xunkai Li , Miao Hu , Guocong Quan

The identification of essential genes/proteins is a critical step towards a better understanding of human biology and pathology. Computational approaches helped to mitigate experimental constraints by exploring machine learning (ML) methods…

Molecular Networks · Quantitative Biology 2021-08-02 João Schapke , Anderson Tavares , Mariana Recamonde-Mendoza

The design and development of text-based knowledge graph completion (KGC) methods leveraging textual entity descriptions are at the forefront of research. These methods involve advanced optimization techniques such as soft prompts and…

Computation and Language · Computer Science 2024-06-28 Rui Yang , Jiahao Zhu , Jianping Man , Li Fang , Yi Zhou

The increasing prevalence of large-scale hypergraphs poses significant computational challenges for hypergraph neural network (HNN) training. To address this, hypergraph condensation (HGC) distills large real hypergraphs into compact yet…

Machine Learning · Computer Science 2026-05-12 Fan Li , Xiaoyang Wang , Chen Chen , Wenjie Zhang

The verification of multithreaded software is still a challenge. This comes mainly from the fact that the number of thread interleavings grows exponentially in the number of threads. The idea that thread interleavings can be studied with a…

Logic in Computer Science · Computer Science 2011-09-27 Robert Mittermayr , Johann Blieberger

Existing graph clustering networks heavily rely on a predefined yet fixed graph, which can lead to failures when the initial graph fails to accurately capture the data topology structure of the embedding space. In order to address this…

Machine Learning · Computer Science 2023-11-15 Zhihao Peng , Hui Liu , Yuheng Jia , Junhui Hou

Protein-protein interactions (PPIs) are crucial in various biological processes and their study has significant implications for drug development and disease diagnosis. Existing deep learning methods suffer from significant performance…

Molecular Networks · Quantitative Biology 2023-05-16 Ziyuan Zhao , Peisheng Qian , Xulei Yang , Zeng Zeng , Cuntai Guan , Wai Leong Tam , Xiaoli Li

As recommendation services scale rapidly and their deployment now commonly involves resource-constrained edge devices, GNN-based recommender systems face significant challenges, including high embedding storage costs and runtime latency…

Information Retrieval · Computer Science 2025-05-27 Xurong Liang , Tong Chen , Wei Yuan , Hongzhi Yin
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