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Graphs and networks are common ways of depicting biological information. In biology, many different biological processes are represented by graphs, such as regulatory networks, metabolic pathways and protein--protein interaction networks.…

Applications · Statistics 2010-11-16 Caiyan Li , Hongzhe Li

Real-world data is often represented through the relationships between data samples, forming a graph structure. In many applications, it is necessary to learn this graph structure from the observed data. Current graph learning research has…

Machine Learning · Statistics 2025-07-15 Abdullah Karaaslanli , Bisakh Banerjee , Tapabrata Maiti , Selin Aviyente

Classically, statistical datasets have a larger number of data points than features ($n > p$). The standard model of classical statistics caters for the case where data points are considered conditionally independent given the parameters.…

Machine Learning · Statistics 2022-03-16 Sijia Li , Martín López-García , Neil D. Lawrence , Luisa Cutillo

Recently, graph prompt learning has garnered increasing attention in adapting pre-trained GNN models for downstream graph learning tasks. However, existing works generally conduct prompting over all graph elements (e.g., nodes, edges, node…

Machine Learning · Computer Science 2024-10-30 Bo Jiang , Hao Wu , Beibei Wang , Jin Tang , Bin Luo

Stochastic optimization algorithms update models with cheap per-iteration costs sequentially, which makes them amenable for large-scale data analysis. Such algorithms have been widely studied for structured sparse models where the sparsity…

Machine Learning · Computer Science 2019-05-10 Baojian Zhou , Feng Chen , Yiming Ying

Recently there has been increasing interest in developing and deploying deep graph learning algorithms for many tasks, such as fraud detection and recommender systems. Albeit, there is a limited number of publicly available graph-structured…

Machine Learning · Computer Science 2023-10-06 Sajad Darabi , Piotr Bigaj , Dawid Majchrowski , Artur Kasymov , Pawel Morkisz , Alex Fit-Florea

This work proposes an algorithmic framework to learn time-varying graphs from online data. The generality offered by the framework renders it model-independent, i.e., it can be theoretically analyzed in its abstract formulation and then…

Machine Learning · Computer Science 2022-05-25 Alberto Natali , Elvin Isufi , Mario Coutino , Geert Leus

Graph classification aims to categorise graphs based on their structure and node attributes. In this work, we propose to tackle this task using tools from graph signal processing by deriving spectral features, which we then use to design…

Machine Learning · Computer Science 2023-06-07 Felix L. Opolka , Yin-Cong Zhi , Pietro Liò , Xiaowen Dong

Image/video data is usually represented with multiple visual features. Fusion of multi-source information for establishing the attributes has been widely recognized. Multi-feature visual recognition has recently received much attention in…

Computer Vision and Pattern Recognition · Computer Science 2016-11-15 Lei Zhang , David Zhang

Graph classification has recently received a lot of attention from various fields of machine learning e.g. kernel methods, sequential modeling or graph embedding. All these approaches offer promising results with different respective…

Machine Learning · Computer Science 2018-11-13 Nathan de Lara , Edouard Pineau

Recent papers have formulated the problem of learning graphs from data as an inverse covariance estimation with graph Laplacian constraints. While such problems are convex, existing methods cannot guarantee that solutions will have specific…

Machine Learning · Statistics 2018-05-09 Eduardo Pavez , Hilmi E. Egilmez , Antonio Ortega

Clustering (or community detection) on multilayer graphs poses several additional complications with respect to standard graphs as different layers may be characterized by different structures and types of information. One of the major…

Machine Learning · Computer Science 2023-06-02 Sara Venturini , Andrea Cristofari , Francesco Rinaldi , Francesco Tudisco

Large agent networks are abundant in applications and nature and pose difficult challenges in the field of multi-agent reinforcement learning (MARL) due to their computational and theoretical complexity. While graphon mean field games and…

Multiagent Systems · Computer Science 2025-11-25 Christian Fabian , Kai Cui , Heinz Koeppl

Graph is a fundamental mathematical structure in characterizing relations between different objects and has been widely used on various learning tasks. Most methods implicitly assume a given graph to be accurate and complete. However, real…

Machine Learning · Computer Science 2024-03-07 Xuanting Xie , Zhao Kang , Wenyu Chen

We explore the usage of meta-learning to derive the causal direction between variables by optimizing over a measure of distribution simplicity. We incorporate a stochastic graph representation which includes latent variables and allows for…

Machine Learning · Computer Science 2021-06-11 Justin Wong , Dominik Damjakob

Random factor graphs provide a powerful framework for the study of inference problems such as decoding problems or the stochastic block model. Information-theoretically the key quantity of interest is the mutual information between the…

Discrete Mathematics · Computer Science 2021-04-27 Amin Coja-Oghlan , Max Hahn-Klimroth , Philipp Loick , Noela Müller , Konstantinos Panagiotou , Matija Pasch

Gaussian graphical models provide a powerful framework for uncovering conditional dependence relationships between sets of nodes; they have found applications in a wide variety of fields including sensor and communication networks, physics,…

Machine Learning · Statistics 2024-10-28 Tianyi Yao , Minjie Wang , Genevera I. Allen

We consider the problem of offline, pool-based active semi-supervised learning on graphs. This problem is important when the labeled data is scarce and expensive whereas unlabeled data is easily available. The data points are represented by…

Machine Learning · Computer Science 2014-05-20 Akshay Gadde , Aamir Anis , Antonio Ortega

We study entanglement properties of mixed density matrices obtained from combinatorial Laplacians. This is done by introducing the notion of the density matrix of a graph. We characterize the graphs with pure density matrices and show that…

Quantum Physics · Physics 2007-05-23 Samuel L. Braunstein , Sibasish Ghosh , Simone Severini

We address the problem of merging graph and feature-space information while learning a metric from structured data. Existing algorithms tackle the problem in an asymmetric way, by either extracting vectorized summaries of the graph…

Machine Learning · Computer Science 2020-02-17 Nicolo Colombo
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