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Gene expression is a cellular process that plays a fundamental role in human phenotypical variations and diseases. Despite advances of deep learning models for gene expression prediction, recent benchmarks have revealed their inability to…

Cell Behavior · Quantitative Biology 2024-10-04 Edouardo Honig , Huixin Zhan , Ying Nian Wu , Zijun Frank Zhang

Likelihood training and maximization-based decoding result in dull and repetitive generated texts even when using powerful language models (Holtzman et al., 2019). Adding a loss function for regularization was shown to improve text…

Computation and Language · Computer Science 2021-01-13 Evgeny Lagutin , Daniil Gavrilov , Pavel Kalaidin

Black box deep learning models trained on genomic sequences excel at predicting the outcomes of different gene regulatory mechanisms. Therefore, interpreting these models may provide novel insights into the underlying biology, supporting…

Machine Learning · Computer Science 2024-07-18 Pedro Barbosa , Rosina Savisaar , Alcides Fonseca

We explore the question of whether the representations learned by classifiers can be used to enhance the quality of generative models. Our conjecture is that labels correspond to characteristics of natural data which are most salient to…

Machine Learning · Statistics 2016-02-16 Alex Lamb , Vincent Dumoulin , Aaron Courville

Document segmentation is a method of rending the document into distinct regions. A document is an assortment of information and a standard mode of conveying information to others. Pursuance of data from documents involves ton of human…

Computer Vision and Pattern Recognition · Computer Science 2013-03-05 N. Priyadharshini , M. S. Vijaya

Automatic text categorization is a complex and useful task for many natural language processing applications. Recent approaches to text categorization focus more on algorithms than on resources involved in this operation. In contrast to…

cmp-lg · Computer Science 2008-02-03 Jose Maria Gomez Hidalgo , Manuel de Buenaga Rodriguez

Our goal in this paper is to automatically extract a set of decision rules (rule set) that best explains a classification data set. First, a large set of decision rules is extracted from a set of decision trees trained on the data set. The…

Neural and Evolutionary Computing · Computer Science 2022-09-19 Paul-Amaury Matt , Rosina Ziegler , Danilo Brajovic , Marco Roth , Marco F. Huber

Image classification is an essential task in computer vision, which aims to categorise a set of images into different groups based on some visual criteria. Existing methods, such as convolutional neural networks, have been successfully…

Neural and Evolutionary Computing · Computer Science 2019-10-01 Benjamin Patrick Evans , Harith Al-Sahaf , Bing Xue , Mengjie Zhang

Varying data augmentation policies and regularization over the course of optimization has led to performance improvements over using fixed values. We show that population based training is a useful tool to continuously search those…

Computation and Language · Computer Science 2020-10-09 Daniel Haziza , Jérémy Rapin , Gabriel Synnaeve

Here we propose an evolutionary algorithm that self modifies its operators at the same time that candidate solutions are evolved. This tackles convergence and lack of diversity issues, leading to better solutions. Operators are represented…

Neural and Evolutionary Computing · Computer Science 2017-12-19 Andres Felipe Cruz Salinas , Jonatan Gomez Perdomo

Text Classification is the most essential and fundamental problem in Natural Language Processing. While numerous recent text classification models applied the sequential deep learning technique, graph neural network-based models can…

Computation and Language · Computer Science 2024-07-08 Kunze Wang , Yihao Ding , Soyeon Caren Han

Recent advancements in text-to-image generation have inspired researchers to generate datasets tailored for perception models using generative models, which prove particularly valuable in scenarios where real-world data is limited. In this…

Computer Vision and Pattern Recognition · Computer Science 2024-06-11 Minho Park , Sunghyun Park , Jooyeol Yun , Jaegul Choo

Modeling real-world phenomena is a focus of many science and engineering efforts, such as ecological modeling and financial forecasting, to name a few. Building an accurate model for complex and dynamic systems improves understanding of…

Artificial Intelligence · Computer Science 2021-03-02 Namyong Park , MinHyeok Kim , Nguyen Xuan Hoai , R. I. , McKay , Dong-Kyun Kim

Design patterns (DPs) are recognised as a good practice in software development. However, the lack of appropriate documentation often hampers traceability, and their benefits are blurred among thousands of lines of code. Automatic methods…

Software Engineering · Computer Science 2024-01-17 Rafael Barbudo , Aurora Ramírez , Francisco Servant , José Raúl Romero

Automatic text classification (TC) research can be used for real-world problems such as the classification of in-patient discharge summaries and medical text reports, which is beneficial to make medical documents more understandable to…

Computation and Language · Computer Science 2018-12-06 Ying Shen , Qiang Zhang , Jin Zhang , Jiyue Huang , Yuming Lu , Kai Lei

Word-vector representations associate a high dimensional real-vector to every word from a corpus. Recently, neural-network based methods have been proposed for learning this representation from large corpora. This type of word-to-vector…

Computation and Language · Computer Science 2017-02-21 Roberto Santana

Most Natural Language Generation systems need to produce accurate texts. We propose a methodology for high-quality human evaluation of the accuracy of generated texts, which is intended to serve as a gold-standard for accuracy evaluations…

Computation and Language · Computer Science 2020-11-10 Craig Thomson , Ehud Reiter

Text generation is the automated process of producing written or spoken language using computational methods. It involves generating coherent and contextually relevant text based on predefined rules or learned patterns. However, challenges…

Computation and Language · Computer Science 2025-01-30 Rahimanuddin Shaik , Katikela Sreeharsha Kishore

Healthcare providers usually record detailed notes of the clinical care delivered to each patient for clinical, research, and billing purposes. Due to the unstructured nature of these narratives, providers employ dedicated staff to assign…

Computation and Language · Computer Science 2022-08-03 Chufan Gao , Mononito Goswami , Jieshi Chen , Artur Dubrawski

Cancer is a term that denotes a group of diseases caused by abnormal growth of cells that can spread in different parts of the body. According to the World Health Organization (WHO), cancer is the second major cause of death after…

Machine Learning · Computer Science 2023-01-31 Fadi Alharbi , Aleksandar Vakanski
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