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We study the parameterized complexity of a recently introduced multi-agent variant of the Kidney Exchange problem. Given a directed graph $G$ and integers $d$ and $k$, the standard problem asks whether $G$ contains a packing of…

Data Structures and Algorithms · Computer Science 2025-10-13 Bart M. P. Jansen , Jeroen S. K. Lamme , Ruben F. A. Verhaegh

Cell nuclei instance segmentation is a crucial task in digital kidney pathology. Traditional automatic segmentation methods often lack generalizability when applied to unseen datasets. Recently, the success of foundation models (FMs) has…

Registries play a key role in service-oriented applications. Originally, they were neutral players between service providers and clients. The UDDI Business Registry (UBR) was meant to foster these concepts and provide a common reference for…

Software Engineering · Computer Science 2010-07-22 Matteo Miraz

The segmentation of kidney layer structures, including cortex, outer stripe, inner stripe, and inner medulla within human kidney whole slide images (WSI) plays an essential role in automated image analysis in renal pathology. However, the…

Image and Video Processing · Electrical Eng. & Systems 2023-09-07 Muhao Liu , Chenyang Qi , Shunxing Bao , Quan Liu , Ruining Deng , Yu Wang , Shilin Zhao , Haichun Yang , Yuankai Huo

The morphometry of a kidney tumor revealed by contrast-enhanced Computed Tomography (CT) imaging is an important factor in clinical decision making surrounding the lesion's diagnosis and treatment. Quantitative study of the relationship…

Objectives: We aim to quantify longitudinal acute kidney injury (AKI) trajectories and to describe transitions through progressing and recovery states and outcomes among hospitalized patients using multistate models. Methods: In this large,…

Quantitative Methods · Quantitative Biology 2023-03-13 Esra Adiyeke , Yuanfang Ren , Ziyuan Guan , Matthew M. Ruppert , Parisa Rashidi , Azra Bihorac , Tezcan Ozrazgat-Baslanti

GPU utilization, measured as occupancy, is limited by the parallel threads' combined usage of on-chip resources, such as registers and the programmer-managed shared memory. Higher resource demand means lower effective parallel thread count,…

Performance · Computer Science 2019-07-08 Putt Sakdhnagool , Amit Sabne , Rudolf Eigenmann

Simulating a shared register can mask the intricacies of designing algorithms for asynchronous message-passing systems subject to crash failures, since it allows them to run algorithms designed for the simpler shared-memory model. Typically…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-08-11 Hagit Attiya , Hyun Chul Chung , Faith Ellen , Saptaparni Kumar , Jennifer L. Welch

Accurate delineation of the boundaries between the renal cortex and medulla is crucial for subsequent functional structural analysis and disease diagnosis. Training high-quality deep-learning models for layer segmentation relies on the…

Image and Video Processing · Electrical Eng. & Systems 2025-03-24 Junchao Zhu , Mengmeng Yin , Ruining Deng , Yitian Long , Yu Wang , Yaohong Wang , Shilin Zhao , Haichun Yang , Yuankai Huo

Precision medicine involves developing individualized treatment regimes (ITRs) which allow for treatment decisions to be tailored to patient characteristics. Naturally, the identification of the optimal regime, that is, the rule which…

Methodology · Statistics 2025-09-30 Misha Dolmatov , Erica E. M. Moodie , David A. Stephens , Dipankar Bandyopadhyay

Kidney structures segmentation is a crucial yet challenging task in the computer-aided diagnosis of surgery-based renal cancer. Although numerous deep learning models have achieved remarkable success in many medical image segmentation…

Image and Video Processing · Electrical Eng. & Systems 2022-08-30 Shishuai Hu , Yiwen Ye , Zehui Liao , Yong Xia

Acute kidney injury (AKI) is a common and serious complication after a surgery which is associated with morbidity and mortality. The majority of existing perioperative AKI risk score prediction models are limited in their generalizability…

Computers and Society · Computer Science 2019-06-19 Lasith Adhikari , Tezcan Ozrazgat-Baslanti , Paul Thottakkara , Ashkan Ebadi , Amir Motaei , Parisa Rashidi , Xiaolin Li , Azra Bihorac

Liver transplant can be a life-saving procedure for patients with end-stage liver disease. With the introduction of modern immunosuppressive therapies, short-term survival has significantly improved. However, long-term survival has not…

Quantitative Methods · Quantitative Biology 2024-11-28 Julia Bruner , Kyle Adams , Skylar Grey , Mahya Aghaee , Sergio Duarte , Ali Zarrinpar , Helen Moore

Liver transplant is an essential therapy performed for severe liver diseases. The fact of scarce liver resources makes the organ assigning crucial. Model for End-stage Liver Disease (MELD) score is a widely adopted criterion when making…

Artificial Intelligence · Computer Science 2023-02-21 Sirui Ding , Ruixiang Tang , Daochen Zha , Na Zou , Kai Zhang , Xiaoqian Jiang , Xia Hu

Recently, joint registration and segmentation has been formulated in a deep learning setting, by the definition of joint loss functions. In this work, we investigate joining these tasks at the architectural level. We propose a registration…

Image and Video Processing · Electrical Eng. & Systems 2020-04-20 Laurens Beljaards , Mohamed S. Elmahdy , Fons Verbeek , Marius Staring

Register allocation (mapping variables to processor registers or memory) and instruction scheduling (reordering instructions to increase instruction-level parallelism) are essential tasks for generating efficient assembly code in a…

Programming Languages · Computer Science 2019-06-10 Roberto Castañeda Lozano , Christian Schulte

Purpose: To improve kidney segmentation in clinical ultrasound (US) images, we develop a new graph cuts based method to segment kidney US images by integrating original image intensity information and texture feature maps extracted using…

Computer Vision and Pattern Recognition · Computer Science 2017-06-13 Qiang Zheng , Steven Warner , Gregory Tasian , Yong Fan

Changing clinical algorithms to remove race adjustment has been proposed and implemented for multiple health conditions. Removing race adjustment from estimated glomerular filtration rate (eGFR) equations may reduce disparities in chronic…

Computers and Society · Computer Science 2024-04-26 Marika M. Cusick , Glenn M. Chertow , Douglas K. Owens , Michelle Y. Williams , Sherri Rose

Parallel architectures are continually increasing in performance and scale, while underlying algorithmic infrastructure often fail to take full advantage of available compute power. Within the context of MPI, irregular communication…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-04-04 Andrew Geyko , Gerald Collom , Derek Schafer , Patrick Bridges , Amanda Bienz

Objective: To improve prediction of Chronic Kidney Disease (CKD) progression to End Stage Renal Disease (ESRD) using machine learning (ML) and deep learning (DL) models applied to an integrated clinical and claims dataset of varying…

Quantitative Methods · Quantitative Biology 2025-05-06 Yubo Li , Rema Padman