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Concept normalization in free-form texts is a crucial step in every text-mining pipeline. Neural architectures based on Bidirectional Encoder Representations from Transformers (BERT) have achieved state-of-the-art results in the biomedical…
Topological Data Analysis (TDA) has emerged recently as a robust tool to extract and compare the structure of datasets. TDA identifies features in data such as connected components and holes and assigns a quantitative measure to these…
We experiment with COVID-Twitter-BERT and RoBERTa models to identify informative COVID-19 tweets. We further experiment with adversarial training to make our models robust. The ensemble of COVID-Twitter-BERT and RoBERTa obtains a F1-score…
Semantic search is an important task which objective is to find the relevant index from a database for query. It requires a retrieval model that can properly learn the semantics of sentences. Transformer-based models are widely used as…
Understanding the public sentiment and perception in a healthcare crisis is essential for developing appropriate crisis management techniques. While some studies have used Twitter data for predictive modelling during COVID-19, fine-grained…
The training of Transformer models has revolutionized natural language processing and computer vision, but it remains a resource-intensive and time-consuming process. This paper investigates the applicability of the early-bird ticket…
The need for skilled medical support is growing in the era of digital healthcare. This research presents an innovative strategy, utilizing the RuBERT model, for categorizing user inquiries in the field of medical consultation with a focus…
This paper presents the model submitted by the NIT_COVID-19 team for identified informative COVID-19 English tweets at WNUT-2020 Task2. This shared task addresses the problem of automatically identifying whether an English tweet related to…
Disease detection from smartphone data represents an open research challenge in mobile health (m-health) systems. COVID-19 and its respiratory symptoms are an important case study in this area and their early detection is a potential real…
In this study, we establish a benchmark for adverse drug event (ADE) detection in Dutch clinical free-text documents using several transformer models, clinical scenarios, and fit-for-purpose performance measures. We trained a Bidirectional…
In the past several months, COVID-19 has spread over the globe and caused severe damage to the people and the society. In the context of this severe situation, an effective drug discovery method to generate potential drugs is extremely…
This paper presents our models for WNUT 2020 shared task2. The shared task2 involves identification of COVID-19 related informative tweets. We treat this as binary text classification problem and experiment with pre-trained language models.…
Detecting Machine-Generated Text (MGT) has emerged as a significant area of study within Natural Language Processing. While language models generate text, they often leave discernible traces, which can be scrutinized using either…
The COVID-19 pandemic has resulted in a tremendous need for access to the latest scientific information, primarily through the use of text mining and search tools. This has led to both corpora for biomedical articles related to COVID-19…
Misinformation of COVID-19 is prevalent on social media as the pandemic unfolds, and the associated risks are extremely high. Thus, it is critical to detect and combat such misinformation. Recently, deep learning models using natural…
Compressed file formats are the corner stone of efficient data storage and transmission, yet their potential for representation learning remains largely underexplored. We introduce TEMPEST (TransformErs froM comPressed rEpreSenTations), a…
Since 2017, the Transformer-based models play critical roles in various downstream Natural Language Processing tasks. However, a common limitation of the attention mechanism utilized in Transformer Encoder is that it cannot automatically…
The CLEF eRisk Laboratory explores solutions to different tasks related to risk detection on the Internet. In the 2023 edition, Task 1 consisted of searching for symptoms of depression, the objective of which was to extract user writings…
This paper describes a system that has been submitted to the "PolyHope-M" at RANLP2025. In this work various transformers have been implemented and evaluated for hope speech detection for English and Germany. RoBERTa has been implemented…
Cell-level dense prediction is central to computational pathology, but remains challenging due to fine-grained histological structures, strong domain shifts, and costly dense annotations. Existing ViT-based pathology foundation models rely…