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Matrix factorization methods - including Factor analysis (FA), and Principal Components Analysis (PCA) - are widely used for inferring and summarizing structure in multivariate data. Many matrix factorization methods exist, corresponding to…

Methodology · Statistics 2021-05-04 Wei Wang , Matthew Stephens

A variety of machine learning tasks---e.g., matrix factorization, topic modelling, and feature allocation---can be viewed as learning the parameters of a probability distribution over bipartite graphs. Recently, a new class of models for…

Machine Learning · Statistics 2017-12-07 Victor Veitch , Ekansh Sharma , Zacharie Naulet , Daniel M. Roy

We present a matrix-factorization algorithm that scales to input matrices with both huge number of rows and columns. Learned factors may be sparse or dense and/or non-negative, which makes our algorithm suitable for dictionary learning,…

Machine Learning · Statistics 2017-11-15 Arthur Mensch , Julien Mairal , Bertrand Thirion , Gael Varoquaux

Medical imaging involves high-dimensional data, yet their acquisition is obtained for limited samples. Multivariate predictive models have become popular in the last decades to fit some external variables from imaging data, and standard…

Applications · Statistics 2018-06-18 Jérôme-Alexis Chevalier , Joseph Salmon , Bertrand Thirion

Deep latent generative models have attracted increasing attention due to the capacity of combining the strengths of deep learning and probabilistic models in an elegant way. The data representations learned with the models are often…

Machine Learning · Computer Science 2023-04-04 Zhao Xu , Daniel Onoro Rubio , Giuseppe Serra , Mathias Niepert

High-dimensional data sets are often analyzed and explored via the construction of a latent low-dimensional space which enables convenient visualization and efficient predictive modeling or clustering. For complex data structures, linear…

Machine Learning · Computer Science 2022-05-25 Oskar Allerbo , Rebecka Jörnsten

Dimensionality reduction and matrix factorization techniques are important and useful machine-learning techniques in many fields. Nonnegative matrix factorization (NMF) is particularly useful for spectral analysis and image processing in…

Instrumentation and Methods for Astrophysics · Physics 2016-12-20 Guangtun Zhu

Sparse neural networks are often hypothesized to be more interpretable than dense models, motivated by findings that weight sparsity can produce compact circuits in language models. However, it remains unclear whether structural sparsity…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Siyu Zhang

Brain networks in fMRI are typically identified using spatial independent component analysis (ICA), yet mathematical constraints such as sparse coding and positivity both provide alternate biologically-plausible frameworks for generating…

Neurons and Cognition · Quantitative Biology 2016-07-05 Jianwen Xie , Pamela K. Douglas , Ying Nian Wu , Arthur L. Brody , Ariana E. Anderson

Mutational signatures are powerful summaries of the mutational processes altering the DNA of cancer cells. The usual approach to mutational signature analysis consists of decomposing the matrix of mutation counts from a sample of patients…

Methodology · Statistics 2026-02-17 Alessandro Zito , Giovanni Parmigiani , Jeffrey W. Miller

Non-Negative Matrix Factorization (NMF) is a widely used dimension reduction method that factorizes a non-negative data matrix into two lower dimensional non-negative matrices: One is the basis or feature matrix which consists of the…

Applications · Statistics 2022-11-03 Yun Cai , Hong Gu , Toby Kenney

Online Health Communities connect patients for peer support, but users face a discovery challenge when they have minimal prior interactions to guide personalization. We study recommendation under extreme interaction sparsity in a survey…

Information Retrieval · Computer Science 2026-04-01 Pronob Kumar Barman , Tera L. Reynolds , James Foulds

Computational phenotyping allows for unsupervised discovery of subgroups of patients as well as corresponding co-occurring medical conditions from electronic health records (EHR). Typically, EHR data contains demographic information,…

Machine Learning · Computer Science 2023-10-18 Florian Becker , Age K. Smilde , Evrim Acar

There is a vast literature on representation learning based on principles such as coding efficiency, statistical independence, causality, controllability, or symmetry. In this paper we propose to learn representations from sequence data by…

Machine Learning · Computer Science 2026-03-11 Yue Song , Thomas Anderson Keller , Yisong Yue , Pietro Perona , Max Welling

Sparsity is regarded as a desirable property of representations, especially in terms of explanation. However, its usage has been limited due to the gap with dense representations. Most NLP research progresses in recent years are based on…

Computation and Language · Computer Science 2019-11-11 Wenpeng Hu , Mengyu Wang , Bing Liu , Feng Ji , Haiqing Chen , Dongyan Zhao , Jinwen Ma , Rui Yan

Matrix factorization (MF) can extract the low-rank features and integrate the information of the data manifold distribution from high-dimensional data, which can consider the nonlinear neighbourhood information. Thus, MF has drawn wide…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-11-24 Zixuan Li , Hao Li , Kenli Li , Fan Wu , Lydia Chen , Keqin Li

Nonnegative Matrix Factorization consists in (approximately) factorizing a nonnegative data matrix by the product of two low-rank nonnegative matrices. It has been successfully applied as a data analysis technique in numerous domains, e.g.,…

Optimization and Control · Mathematics 2012-08-13 Nicolas Gillis , François Glineur

This paper emphasizes the significance to jointly exploit the problem structure and the parameter structure, in the context of deep modeling. As a specific and interesting example, we describe the deep double sparsity encoder (DDSE), which…

Machine Learning · Computer Science 2016-10-04 Zhangyang Wang , Thomas S. Huang

Sparse representation with training-based dictionary has been shown successful on super resolution(SR) but still have some limitations. Based on the idea of making the magnification of function curve without losing its fidelity, we proposed…

Computer Vision and Pattern Recognition · Computer Science 2019-06-12 Junyi Bian , Baojun Lin , Ke Zhang

Nonnegative CANDECOMP/PARAFAC (NCP) decomposition is an important tool to process nonnegative tensor. Sometimes, additional sparse regularization is needed to extract meaningful nonnegative and sparse components. Thus, an optimization…

Machine Learning · Statistics 2018-12-31 Deqing Wang , Fengyu Cong , Tapani Ristaniemi