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We present multiscale models of cancer tumor invasion with components at the molecular, cellular, and tissue levels. We provide biological justifications for the model components, present computational results from the model, and discuss…

Quantitative Methods · Quantitative Biology 2023-02-14 Bruce P. Ayati , Glenn F. Webb , Alexander R. A. Anderson

Computational pathology is part of precision oncology medicine. The integration of high-throughput data including genomics, transcriptomics, proteomics, metabolomics, pathomics, and radiomics into clinical practice improves cancer treatment…

Image and Video Processing · Electrical Eng. & Systems 2022-06-07 Liangrui Pan , Zhichao Feng , Shaoliang Peng

In the present article the diffusion equation is used to model the spatio-temporal dynamics of a tumor, taking into account the heterogeneous of the medium. This approach makes it possible to take into account the complex geometric shape of…

Biological Physics · Physics 2023-02-07 Maxim V. Polyakov , Valeria V. Ten

The speed and the versatility of today's computers open up new opportunities to simulate complex biological systems. Here we review a computational approach recently proposed by us to model large tumor cell populations and spheroids, and we…

Tissues and Organs · Quantitative Biology 2010-12-13 Roberto Chignola , Alessio Del Fabbro , Marcello Farina , Edoardo Milotti

The spread of metastases is a crucial process in which some questions remain unanswered. In this work, we focus on tumor cells circulating in the bloodstream, the so-called Circulating Tumor Cells (CTCs). Our aim is to characterize their…

Tissues and Organs · Quantitative Biology 2025-01-22 Giorgia Ciavolella , Julien Granet , Jacky Goetz , Nael Osmani , Christèle Etchegaray , Annabelle Collin

The study of thrombosis is crucial to understand and develop new therapies for diseases like deep vein thrombosis, diabetes related strokes, pulmonary embolism etc. The last two decades have seen an exponential growth in studies related to…

Medical Physics · Physics 2019-11-28 Sumith Yesudasan , Rodney D. Averett

Intra-operative identification of malignant versus benign or healthy tissue is a major challenge in fluorescence guided cancer surgery. We propose a perfusion quantification method for computer-aided interpretation of subtle differences in…

Image and Video Processing · Electrical Eng. & Systems 2020-06-26 Sergiy Zhuk , Jonathan P. Epperlein , Rahul Nair , Seshu Thirupati , Pol Mac Aonghusa , Ronan Cahill , Donal O'Shea

Mathematical oncology provides unique and invaluable insights into tumour growth on both the microscopic and macroscopic levels. This review presents state-of-the-art modelling techniques and focuses on their role in understanding…

We present a problem-suited numerical method for a particularly challenging cancer invasion model. This model is a multiscale haptotaxis advection-reaction-diffusion system that describes the macroscopic dynamics of two types of cancer…

Numerical Analysis · Mathematics 2016-05-18 Niklas Kolbe , Maria Lukacova-Medvidova , Nikolaos Sfakianakis , Bettina Wiebe

A systematic understanding of the evolution and growth dynamics of invasive solid tumors in response to different chemotherapy strategies is crucial for the development of individually optimized oncotherapy. Here, we develop a hybrid…

Tissues and Organs · Quantitative Biology 2020-07-01 Hang Xie , Yang Jiao , Qihui Fan , Miaomiao Hai , Jiaen Yang , Zhijian Hu , Yue Yang , Jianwei Shuai , Guo Chen , Ruchuan Liu , Liyu Liu

The histological assessment of human tissue has emerged as the key challenge for detection and treatment of cancer. A plethora of different data sources ranging from tissue microarray data to gene expression, proteomics or metabolomics data…

Computer Vision and Pattern Recognition · Computer Science 2016-01-05 Thomas J. Fuchs , Joachim M. Buhmann

Recent advances in types and extent of medical imaging technologies has led to proliferation of multimodal quantitative imaging data in cancer. Quantitative medical imaging data refer to numerical representations derived from medical…

Computational modeling of cancer can help unveil dynamics and interactions that are hard to replicate experimentally. Thanks to the advancement in cancer databases and data analysis technologies, these models have become more robust than…

Quantitative Methods · Quantitative Biology 2023-11-07 Navid Mohammad Mirzaei , Leili Shahriyari

Recent advances in cancer research largely rely on new developments in microscopic or molecular profiling techniques offering high level of detail with respect to either spatial or molecular features, but usually not both. Here, we present…

Tumor growth prediction, a highly challenging task, has long been viewed as a mathematical modeling problem, where the tumor growth pattern is personalized based on imaging and clinical data of a target patient. Though mathematical models…

Computer Vision and Pattern Recognition · Computer Science 2017-06-05 Ling Zhang , Le Lu , Ronald M. Summers , Electron Kebebew , Jianhua Yao

Tumor growth has long been a target of investigation within the context of mathematical and computer modelling. The objective of this study is to propose and analyze a two-dimensional probabilistic cellular automata model to describe…

Tissues and Organs · Quantitative Biology 2009-11-13 E. A. Reis , L. B. L. Santos , S. T. R. Pinho

The focus of pancreatic cancer research has been shifted from pancreatic cancer cells towards their microenvironment, involving pancreatic stellate cells that interact with cancer cells and influence tumor progression. To quantitatively…

Quantitative Methods · Quantitative Biology 2016-06-13 Qinsi Wang , Natasa Miskov-Zivanov , Bing Liu , James R. Faeder , Michael Lotze , Edmund M. Clarke

Mathematical modeling in cancer has been growing in popularity and impact since its inception in 1932. The first theoretical mathematical modeling in cancer research was focused on understanding tumor growth laws and has grown to include…

Tissues and Organs · Quantitative Biology 2013-05-22 Jacob G. Scott , Philip Gerlee , David Basanta , Alexander G. Fletcher , Philip K. Maini , Alexander RA Anderson

Cancer pathology is unique to a given individual, and developing personalized diagnostic and treatment protocols are a primary concern. Mathematical modeling and simulation is a promising approach to personalized cancer medicine. Yet, the…

Tissues and Organs · Quantitative Biology 2020-08-03 Alvaro Köhn-Luque , Xiaoran Lai , Arnoldo Frigessi

Understanding the dynamics of brain tumor progression is essential for optimal treatment planning. Cast in a mathematical formulation, it is typically viewed as evaluation of a system of partial differential equations, wherein the…

Quantitative Methods · Quantitative Biology 2020-01-13 Ivan Ezhov , Jana Lipkova , Suprosanna Shit , Florian Kofler , Nore Collomb , Benjamin Lemasson , Emmanuel Barbier , Bjoern Menze
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