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Graph Transformer (GT), as a special type of Graph Neural Networks (GNNs), utilizes multi-head attention to facilitate high-order message passing. However, this also imposes several limitations in node classification applications: 1) nodes…

Machine Learning · Computer Science 2024-10-16 Jiajun Zhou , Xuanze Chen , Chenxuan Xie , Yu Shanqing , Qi Xuan , Xiaoniu Yang

Privacy-preserving deep neural network (DNN) inference is a necessity in different regulated industries such as healthcare, finance and retail. Recently, homomorphic encryption (HE) has been used as a method to enable analytics while…

Cryptography and Security · Computer Science 2023-06-13 Moran Baruch , Nir Drucker , Lev Greenberg , Guy Moshkowich

Privacy-preserving deep learning addresses privacy concerns in Machine Learning as a Service (MLaaS) by using Homomorphic Encryption (HE) for linear computations. However, the computational overhead remains a major challenge. While prior…

Cryptography and Security · Computer Science 2026-01-30 Yifei Cai , Yizhou Feng , Qiao Zhang , Chunsheng Xin , Hongyi Wu

We present DFT-FE 1.0, building on DFT-FE 0.6 [Comput. Phys. Commun. 246, 106853 (2020)], to conduct fast and accurate large-scale density functional theory (DFT) calculations (reaching ~ $100,000$ electrons) on both many-core CPU and…

Computational Physics · Physics 2022-08-31 Sambit Das , Phani Motamarri , Vishal Subramanian , David M. Rogers , Vikram Gavini

Fully Homomorphic Encryption (FHE) enables computation directly on encrypted data but incurs massive computational and memory overheads, often exceeding plaintext execution by several orders of magnitude. While custom ASIC accelerators can…

In this paper, we present a practical solution to implement privacy-preserving CNN training based on mere Homomorphic Encryption (HE) technique. To our best knowledge, this is the first attempt successfully to crack this nut and no work…

Cryptography and Security · Computer Science 2025-04-16 John Chiang

The Discrete Fourier Transform (DFT) is central to the analysis of uniformly sampled signals, yet many practical applications involve non-uniform sampling, requiring the Non-Uniform Discrete Fourier Transform (NUDFT). While quantum…

Quantum Physics · Physics 2026-03-18 Junaid Aftab , Yuehaw Khoo , Haizhao Yang

The combinations of machine learning with ab initio methods have attracted much attention for their potential to resolve the accuracy-efficiency dilemma and facilitate calculations for large-scale systems. Recently, equivariant message…

Computational Physics · Physics 2025-09-08 Zhixin Liang , Yunlong Wang , Chi Ding , Junjie Wang , Hui-Tian Wang , Dingyu Xing , Jian Sun

As the importance of Privacy-Preserving Inference of Transformers (PiT) increases, a hybrid protocol that integrates Garbled Circuits (GC) and Homomorphic Encryption (HE) is emerging for its implementation. While this protocol is preferred…

Hardware Architecture · Computer Science 2025-02-25 Hyunjun Cho , Jaeho Jeon , Jaehoon Heo , Joo-Young Kim

This paper presents the design and evaluation of a GPU-accelerated inference pipeline for transformer models using NVIDIA TensorRT with mixed-precision optimization. We evaluate BERT-base (110M parameters) and GPT-2 (124M parameters) across…

Machine Learning · Computer Science 2026-03-31 Soutrik Mukherjee , Sangwhan Cha

Finite-element (FE) discretisations have emerged as a powerful real-space alternative to large-scale Kohn-Sham density functional theory (DFT) calculations, offering systematic convergence, excellent parallel scalability, while…

Computational Physics · Physics 2025-12-11 Gourab Panigrahi , Phani Motamarri

In this work, we propose an open-source, first-of-its-kind, arithmetic hardware library with a focus on accelerating the arithmetic operations involved in Ring Learning with Error (RLWE)-based somewhat homomorphic encryption (SHE). We…

Cryptography and Security · Computer Science 2020-07-06 Rashmi Agrawal , Lake Bu , Alan Ehret , Michel A. Kinsy

Recent years have witnessed the emerging success of graph neural networks (GNNs) for modeling structured data. However, most GNNs are designed for homogeneous graphs, in which all nodes and edges belong to the same types, making them…

Machine Learning · Computer Science 2020-03-04 Ziniu Hu , Yuxiao Dong , Kuansan Wang , Yizhou Sun

Transformer requires a fixed number of layers and heads which makes them inflexible to the complexity of individual samples and expensive in training and inference. To address this, we propose a sample-based Dynamic Hierarchical Transformer…

Machine Learning · Computer Science 2024-01-11 Fanfei Meng , Lele Zhang , Yu Chen , Yuxin Wang

The 2-D discrete wavelet transform (DWT) can be found in the heart of many image-processing algorithms. Until recently, several studies have compared the performance of such transform on various shared-memory parallel architectures,…

Performance · Computer Science 2017-05-30 David Barina , Michal Kula , Michal Matysek , Pavel Zemcik

Inspired by the concept of fault tolerance quantum computation, this article proposes a framework dubbed Exact Homomorphic Encryption, EHE, enabling exact computations on encrypted data without the need for pre-decryption. The introduction…

Quantum Physics · Physics 2024-05-10 Zheng-Yao Su , Ming-Chung Tsai

The well-known discrete Fourier transform (DFT) can easily be generalized to arbitrary nodes in the spatial domain. The fast procedure for this generalization is referred to as nonequispaced fast Fourier transform (NFFT). Various…

Numerical Analysis · Mathematics 2025-06-09 Melanie Kircheis , Daniel Potts

Cloud computing is an important part of today's world because offloading computations is a method to reduce costs. In this paper, we investigate computing the Speeded Up Robust Features (SURF) using Fully Homomorphic Encryption (FHE).…

Computer Vision and Pattern Recognition · Computer Science 2017-07-20 Thomas Shortell , Ali Shokoufandeh

Homomorphic encryption (HE) enables computations on encrypted data by concealing information under noise for security. However, the process of bootstrapping, which resets the noise level in the ciphertext, is computationally expensive and…

Cryptography and Security · Computer Science 2023-05-22 Adiwena Putra , Prasetiyo , Yi Chen , John Kim , Joo-Young Kim

Training deep neural networks (DNNs) requires significantly more computation and memory than inference, making runtime adaptation of DNNs challenging on resource-limited IoT platforms. We propose InstantFT, an FPGA-based method for…

Machine Learning · Computer Science 2025-06-10 Keisuke Sugiura , Hiroki Matsutani