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Related papers: Drugs4Covid: Drug-driven Knowledge Exploitation ba…

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Recent advances in the healthcare industry have led to an abundance of unstructured data, making it challenging to perform tasks such as efficient and accurate information retrieval at scale. Our work offers an all-in-one scalable solution…

Information Retrieval · Computer Science 2023-02-15 Shreya Saxena , Raj Sangani , Siva Prasad , Shubham Kumar , Mihir Athale , Rohan Awhad , Vishal Vaddina

The COVID-19 pandemic has resulted in a tremendous need for access to the latest scientific information, primarily through the use of text mining and search tools. This has led to both corpora for biomedical articles related to COVID-19…

Information Retrieval · Computer Science 2020-07-29 Sarvesh Soni , Kirk Roberts

The integration of machine learning methods into bioinformatics provides particular benefits in identifying how therapeutics effective in one context might have utility in an unknown clinical context or against a novel pathology. We aim to…

Machine Learning · Computer Science 2020-06-29 Semih Cantürk , Aman Singh , Patrick St-Amant , Jason Behrmann

A dataset of COVID-19-related scientific literature is compiled, combining the articles from several online libraries and selecting those with open access and full text available. Then, hierarchical nonnegative matrix factorization is used…

The COVID-19 pandemic requires a fast response from researchers to help address biological, medical and public health issues to minimize its impact. In this rapidly evolving context, scholars, professionals and the public may need to…

Digital Libraries · Computer Science 2020-04-23 Kayvan Kousha , Mike Thelwall

The COVID-19 pandemic has sparked unprecedented mobilization of scientists, generating a deluge of papers that makes it hard for researchers to keep track and explore new directions. Search engines are designed for targeted queries, not for…

Information Retrieval · Computer Science 2020-09-22 Tom Hope , Jason Portenoy , Kishore Vasan , Jonathan Borchardt , Eric Horvitz , Daniel S. Weld , Marti A. Hearst , Jevin West

Background Medical and life science research generates millions of publications, and it is a great challenge for researchers to utilize this information in full since its scale and complexity greatly surpasses human reading capabilities.…

This paper presents a project, named VIDAR-19, able to extract automatically diseases from the CORD-19 dataset, and also diseases which might be considered as risk factors. The project relies on the ICD-11 classification of diseases…

Information Retrieval · Computer Science 2020-05-05 Francis Wolinski

The COVID-19 pandemic catalyzed the rapid dissemination of papers and preprints investigating the disease and its associated virus, SARS-CoV-2. The multifaceted nature of COVID-19 demands a multidisciplinary approach, but the urgency of the…

This paper investigates the relationships among key elements of the scientific research network, namely articles, researchers, and journals. We introduce a novel approach to use semantic information through the HITS algorithm-based…

Social and Information Networks · Computer Science 2024-11-22 Mehmet Emre Akbulut , Yusuf Erdem Nacar

Clinicians face several significant barriers to search and synthesize accurate, succinct, updated, and trustworthy medical information from several literature sources during the practice of medicine and patient care. In this talk, we will…

The novel coronavirus disease, named COVID-19, emerged in China in December 2019, and has rapidly spread around the world. It is clearly urgent to fight COVID-19 at global scale. The development of methods for identifying drug uses based on…

Quantitative Methods · Quantitative Biology 2021-10-06 Lu Han , G. C. Shan , B. F. Chu , H. Y. Wang , Z. J. Wang , S. Q. Gao , W. X. Zhou

Drug repurposing is an unconventional approach that is used to investigate new therapeutic aids of existing and shelved drugs. Recent advancement in technologies and the availability of the data of genomics, proteomics, transcriptomics,…

Quantitative Methods · Quantitative Biology 2022-07-27 Imra Aqeel , Abdul Majid , Muhammad Ismail , Hina Bashir

With the proliferation of research means and computational methodologies, published biomedical literature is growing exponentially in numbers and volume. Cancer cell lines are frequently used models in biological and medical research that…

Computation and Language · Computer Science 2024-02-13 Ellery Smith , Rahel Paloots , Dimitris Giagkos , Michael Baudis , Kurt Stockinger

This paper makes four scientific contributions to the area of misinformation detection and analysis on digital platforms, with a specific focus on investigating how conspiracy theories, fake remedies, and false reports emerge, propagate,…

Social and Information Networks · Computer Science 2025-03-20 Nirmalya Thakur , Mingchen Shao , Victoria Knieling , Vanessa Su , Andrew Bian , Hongseok Jeong

Coronavirus disease 2019 (COVID-19) is a global pandemic. Although much has been learned about the novel coronavirus since its emergence, there are many open questions related to tracking its spread, describing symptomology, predicting the…

Computation and Language · Computer Science 2021-03-12 Kevin Lybarger , Mari Ostendorf , Matthew Thompson , Meliha Yetisgen

Doctoral theses are an important source of publication in universities, although little research has been carried out on the publications resulting from theses, on so-called derivative articles. This study investigates how derivative…

Digital Libraries · Computer Science 2017-07-17 Mercedes Echeverria , David Stuart , Tobias Blanke

The outbreak of the SARS-CoV-2 pandemic of the new COVID-19 disease (COVID-19 for short) demands empowering existing medical, economic, and social emergency backend systems with data analytics capabilities. An impediment in taking…

Software Engineering · Computer Science 2021-10-14 Aakash Ahmad , Madhushi Bandara , Mahdi Fahmideh , Henderik A. Proper , Giancarlo Guizzardi , Jeffrey Soar

Clinical document metadata, such as document type, structure, author role, medical specialty, and encounter setting, is essential for accurate interpretation of information captured in clinical documents. However, vast documentation…

Computation and Language · Computer Science 2026-01-16 Kurt Miller , Qiuhao Lu , William Hersh , Kirk Roberts , Steven Bedrick , Andrew Wen , Hongfang Liu