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Related papers: A Sparse Delaunay Filtration

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Matrix reduction is the standard procedure for computing the persistent homology of a filtered simplicial complex with $m$ simplices. Its output is a particular decomposition of the total boundary matrix, from which the persistence diagrams…

Computational Geometry · Computer Science 2023-10-17 Matthew Piekenbrock , Jose A. Perea

Delaunay protection is a measure of how far a Delaunay triangulation is from being degenerate. In this short paper we study the protection properties and other quality measures of the Delaunay triangulations of a family of lattices that is…

Computational Geometry · Computer Science 2019-03-08 Aruni Choudhary , Arijit Ghosh

In this paper, we consider the extensively studied problem of computing a $k$-sparse approximation to the $d$-dimensional Fourier transform of a length $n$ signal. Our algorithm uses $O(k \log k \log n)$ samples, is dimension-free, operates…

Data Structures and Algorithms · Computer Science 2019-09-26 Vasileios Nakos , Zhao Song , Zhengyu Wang

We consider the complexity of Delaunay triangulations of sets of points in R^3 under certain practical geometric constraints. The spread of a set of points is the ratio between the longest and shortest pairwise distances. We show that in…

Computational Geometry · Computer Science 2007-05-23 Jeff Erickson

The objective of this paper is to examine the asymptotic behavior of persistence diagrams associated with \v{C}ech filtration. A persistence diagram is a graphical descriptor of a topological and algebraic structure of geometric objects. We…

Probability · Mathematics 2021-09-15 Takashi Owada

We describe a new algorithm for computing the Voronoi diagram of a set of $n$ points in constant-dimensional Euclidean space. The running time of our algorithm is $O(f \log n \log \Delta)$ where $f$ is the output complexity of the Voronoi…

Computational Geometry · Computer Science 2013-04-03 Gary L. Miller , Donald R. Sheehy

The simulation of many-particle systems often requires the detailed knowledge of proximity relations to reduce computational complexity and to provide a basis for specific calculations. Here we describe the basic scheme of a simulator of…

Biological Physics · Physics 2007-05-23 Alessio Del Fabbro , Roberto Chignola , Edoardo Milotti

Persistent homology of the Rips filtration allows to track topological features of a point cloud over scales, and is a foundational tool of topological data analysis. Unfortunately, the Rips-filtration is exponentially sized, when…

Computational Geometry · Computer Science 2018-07-27 Bernhard Brehm , Hanne Hardering

Given a finite set in a metric space, the topological analysis generalizes hierarchical clustering using a 1-parameter family of homology groups to quantify connectivity in all dimensions. The connectivity is compactly described by the…

Computational Geometry · Computer Science 2016-07-22 Herbert Edelsbrunner , Hubert Wagner

Given a set P of n points and a constant k, we are interested in computing the persistent homology of the Cech filtration of P for the k-distance, and investigate the effectiveness of dimensionality reduction for this problem, answering an…

Computational Geometry · Computer Science 2021-10-13 Shreya Arya , Jean-Daniel Boissonnat , Kunal Dutta , Martin Lotz

We describe a new data structure for dynamic nearest neighbor queries in the plane with respect to a general family of distance functions. These include $L_p$-norms and additively weighted Euclidean distances. Our data structure supports…

Computational Geometry · Computer Science 2020-10-02 Haim Kaplan , Wolfgang Mulzer , Liam Roditty , Paul Seiferth , Micha Sharir

Classical methods to model topological properties of point clouds, such as the Vietoris-Rips complex, suffer from the combinatorial explosion of complex sizes. We propose a novel technique to approximate a multi-scale filtration of the Rips…

Computational Geometry · Computer Science 2016-04-04 Aruni Choudhary , Michael Kerber , Sharath Raghvendra

In this paper, we give the first algorithm that outputs a faithful reconstruction of a submanifold of Euclidean space without maintaining or even constructing complicated data structures such as Voronoi diagrams or Delaunay complexes. Our…

Computational Geometry · Computer Science 2017-08-08 Jean-Daniel Boissonnat , Ramsay Dyer , Arijit Ghosh , Steve Y. Oudot

The recently introduced discrete persistent structure extractor (DisPerSE, Soubie 2010, paper I) is implemented on realistic 3D cosmological simulations and observed redshift catalogues (SDSS); it is found that DisPerSE traces equally well…

Cosmology and Nongalactic Astrophysics · Physics 2015-05-20 Thierry Sousbie , Christophe Pichon , Hajime Kawahara

We initiate the study of approximation algorithms and computational barriers for constructing sparse $\alpha$-navigable graphs [IX23, DGM+24], a core primitive underlying recent advances in graph-based nearest neighbor search. Given an…

Data Structures and Algorithms · Computer Science 2025-07-21 Sanjeev Khanna , Ashwin Padaki , Erik Waingarten

We consider the construction of a polyhedral Delaunay partition as a limit of the sequence of power diagrams (radical partitions). The dual Voronoi diagram is obtained as a limit of the sequence of weighted Delaunay partitions. The problem…

Numerical Analysis · Mathematics 2023-11-15 Vladimir Garanzha , Liudmila Kudryavtseva , Lennard Kamenski

We introduce a linear dimensionality reduction technique preserving topological features via persistent homology. The method is designed to find linear projection $L$ which preserves the persistent diagram of a point cloud $\mathbb{X}$ via…

Machine Learning · Statistics 2021-06-15 Byeongsu Yu , Kisung You

Biological and physical systems often exhibit distinct structures at different spatial/temporal scales. Persistent homology is an algebraic tool that provides a mathematical framework for analyzing the multi-scale structures frequently…

Algebraic Topology · Mathematics 2016-02-01 Jonathan Jaquette , Miroslav Kramár

The Rips filtration over a finite metric space and its corresponding persistent homology are prominent methods in TDA to summarise the shape of data. Crucial to their use is the bottleneck stability result. A generalisation of the Rips…

Algebraic Topology · Mathematics 2019-05-29 Katharine Turner

This article presents the formal proof of correctness for a plane Delaunay triangulation algorithm. It consists in repeating a sequence of edge flippings from an initial triangulation until the Delaunay property is achieved. To describe…

Logic in Computer Science · Computer Science 2010-07-26 Jean-François Dufourd , Yves Bertot