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Metrically homogeneous graphs are connected graphs which, when endowed with the path metric, are homogeneous as metric spaces. In this paper we introduce the concept of twisted automorphisms, a notion of isomorphism up to a permutation of…

Logic · Mathematics 2018-02-05 Rebecca Coulson

Deep generative models for graphs have exhibited promising performance in ever-increasing domains such as design of molecules (i.e, graph of atoms) and structure prediction of proteins (i.e., graph of amino acids). Existing work typically…

Machine Learning · Computer Science 2021-01-21 Wenbin Zhang , Liming Zhang , Dieter Pfoser , Liang Zhao

A graph is a powerful concept for representation of relations between pairs of entities. Data with underlying graph structure can be found across many disciplines and there is a natural desire for understanding such data better. Deep…

Machine Learning · Computer Science 2019-01-25 Martin Simonovsky

A topology is defined on the mapping class group of a compact connected orientable surface. It is shown that a notion of "genericity" on subsets of the mapping class group arises from this definition. Many plausible results follow from this…

Geometric Topology · Mathematics 2025-08-06 Ingrid Irmer

Graphs and hypergraphs combine expressive modeling power with algorithmic efficiency for a wide range of applications. Hedgegraphs generalize hypergraphs further by grouping hyperedges under a color/hedge. This allows hedgegraphs to model…

Data Structures and Algorithms · Computer Science 2025-10-30 Karthekeyan Chandrasekaran , Chandra Chekuri , Weihang Wang , Weihao Zhu

Directed and heterogeneous hypergraphs capture directional higher-order interactions with intrinsically asymmetric functional dependencies among nodes. As a result, damage to certain nodes can suppress entire hyperedges, whereas failure of…

Disordered Systems and Neural Networks · Physics 2026-01-29 Yunxue Sun , Xueming Liu , Ginestra Bianconi

A digraph is connected-homogeneous if any isomorphism between finite connected induced subdigraphs extends to an automorphism of the digraph. We consider locally-finite connected-homogeneous digraphs with more than one end. In the case that…

Combinatorics · Mathematics 2010-11-30 Robert Gray , Rognvaldur G. Moller

Directed graphs naturally model systems with asymmetric, ordered relationships, essential to applications in biology, transportation, social networks, and visual understanding. Generating such graphs enables tasks such as simulation, data…

Machine Learning · Computer Science 2026-02-20 Alba Carballo-Castro , Manuel Madeira , Yiming Qin , Dorina Thanou , Pascal Frossard

We study hypergraph visualization via its topological simplification. We explore both vertex simplification and hyperedge simplification of hypergraphs using tools from topological data analysis. In particular, we transform a hypergraph to…

Human-Computer Interaction · Computer Science 2021-04-23 Youjia Zhou , Archit Rathore , Emilie Purvine , Bei Wang

In this paper we explore mathematical tools that can be used to relate directed and undirected random graph models to each other. We identify probability spaces on which a directed and an undirected graph model are equivalent, and…

Probability · Mathematics 2025-03-03 Mike van Santvoort , Pim van der Hoorn

Hierarchical structure and repetition are prevalent in graphs originating from nature or engineering. These patterns can be represented by a class of parametric-structure graphs, which are defined by templates that generate structure by way…

Data Structures and Algorithms · Computer Science 2020-11-16 Tal Ben-Nun , Lukas Gianinazzi , Torsten Hoefler , Yishai Oltchik

Understanding the topological characteristics of data is important to many areas of research. Recent work has demonstrated that synthetic 4D image-type data can be useful to train 4D convolutional neural network models to see topological…

Computer Vision and Pattern Recognition · Computer Science 2024-10-10 Khalil Mathieu Hannouch , Stephan Chalup

Our goal is to infer the topology of a network when (i) we can send probes between sources and receivers at the edge of the network and (ii) intermediate nodes can perform simple network coding operations, i.e., additions. Our key intuition…

Networking and Internet Architecture · Computer Science 2013-02-07 Pegah Sattari , Christina Fragouli , Athina Markopoulou

A directed acyclic hypergraph is a generalized concept of a directed acyclic graph, where each hyperedge can contain an arbitrary number of tails and heads. Directed hypergraphs can be used to model data flow and execution dependencies in…

Data Structures and Algorithms · Computer Science 2020-10-16 Merten Popp , Sebastian Schlag , Christian Schulz , Daniel Seemaier

This thesis captures the ongoing development of twisted cubes, which is a modification of cubes (in a topological sense) where its homotopy type theory does not require paths or higher paths to be invertible. My original motivation to…

Logic in Computer Science · Computer Science 2023-07-06 Gun Pinyo

Despite the enormous success of graph neural networks (GNNs), most existing GNNs can only be applicable to undirected graphs where relationships among connected nodes are two-way symmetric (i.e., information can be passed back and forth).…

Machine Learning · Computer Science 2021-10-15 Zhuo Tan , Bin Liu , Guosheng Yin

Inferring topological and geometrical information from data can offer an alternative perspective on machine learning problems. Methods from topological data analysis, e.g., persistent homology, enable us to obtain such information,…

Computer Vision and Pattern Recognition · Computer Science 2018-02-19 Christoph Hofer , Roland Kwitt , Marc Niethammer , Andreas Uhl

The purpose of this paper is to outline a generalised model for representing hybrids of relational-categorical, symbolic, perceptual-sensory and perceptual-latent data, so as to embody, in the same architectural data layer, representations…

Machine Learning · Computer Science 2020-04-29 Bogdan Bocse , Ioan Radu Jinga

Geometric graphs are a special kind of graph with geometric features, which are vital to model many scientific problems. Unlike generic graphs, geometric graphs often exhibit physical symmetries of translations, rotations, and reflections,…

Many complex systems involve interactions between more than two agents. Hypergraphs capture these higher-order interactions through hyperedges that may link more than two nodes. We consider the problem of embedding a hypergraph into…

Social and Information Networks · Computer Science 2023-01-06 Xue Gong , Desmond J. Higham , Konstantinos Zygalakis
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