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Public health surveillance aims at lessening disease burden, e.g., in case of infectious diseases by timely recognizing emerging outbreaks. Seen from a statistical perspective, this implies the use of appropriate methods for monitoring time…

Computation · Statistics 2017-01-26 Salmon Maëlle , Schumacher Dirk , Höhle Michael

When faced with new data, we often conduct a cluster analysis to obtain a better understanding of the data's structure and the archetypical samples present in the data. This process often includes visualization of the data, either as a way…

Applications · Statistics 2026-04-06 Justin Lin , Julia Fukuyama

Extensions in the field of joint modeling of correlated data and dynamic predictions improve the development of prognosis research. The R package frailtypack provides estimations of various joint models for longitudinal data and survival…

This article develops flexible methodology to study the association between scalar outcomes and functional predictors observed over time, at many instances, in longitudinal studies. We propose a parsimonious modeling framework to study…

Applications · Statistics 2018-01-25 Md Nazmul Islam , Ana-Maria Staicu , Eric van Heugten

The R package BigVAR allows for the simultaneous estimation of high-dimensional time series by applying structured penalties to the conventional vector autoregression (VAR) and vector autoregression with exogenous variables (VARX)…

Computation · Statistics 2017-02-24 William Nicholson , David Matteson , Jacob Bien

The longevity R package provides provide maximum likelihood estimation routine for modelling of survival data that are subject to non-informative censoring and truncation mechanisms. It includes a selection of 12 parametric models of…

Applications · Statistics 2023-11-17 Léo R. Belzile

robustloggamma is an R package for robust estimation and inference in the generalized loggamma model. We briefly introduce the model, the estimation procedures and the computational algorithms. Then, we illustrate the use of the package…

Computation · Statistics 2015-12-08 Claudio Agostinelli , Alfio Marazzi , Victor J. Yohai , Alex Randriamiharisoa

The R-package phtt provides estimation procedures for panel data with large dimensions n, T, and general forms of unobservable heterogeneous effects. Particularly, the estimation procedures are those of Bai (2009) and Kneip, Sickles, and…

Computation · Statistics 2014-07-25 Oualid Bada , Dominik Liebl

This work presents a guide for the use of some of the functions of the R package "multiColl" for the detection of near multicollinearity. The main contribution, in comparison to other existing packages in R or other econometric software, is…

Computation · Statistics 2019-11-01 Román Salmerón , Catalina García , José García

An R package for specifying and estimating linear latent variable models is presented. The philosophy of the implementation is to separate the model specification from the actual data, which leads to a dynamic and easy way of modeling…

Computation · Statistics 2013-12-10 Klaus K. Holst , Esben Budtz-Jørgensen

We propose a new method for modelling simple longitudinal data. We aim to do this in a flexible manner (without restrictive assumptions about the shapes of individual trajectories), while exploiting structural similarities between the…

Methodology · Statistics 2024-09-24 Helen Ogden

Disaggregation modelling, or downscaling, has become an important discipline in epidemiology. Surveillance data, aggregated over large regions, is becoming more common, leading to an increasing demand for modelling frameworks that can deal…

Computation · Statistics 2020-01-15 Anita K. Nandi , Tim C. D. Lucas , Rohan Arambepola , Peter Gething , Daniel J. Weiss

Longitudinal studies, where a series of images from the same set of individuals are acquired at different time-points, represent a popular technique for studying and characterizing temporal dynamics in biomedical applications. The classical…

Image and Video Processing · Electrical Eng. & Systems 2023-04-18 Heejong Kim , Mert R. Sabuncu

The Granger framework is useful for discovering causal relations in time-varying signals. However, most Granger causality (GC) methods are developed for densely sampled timeseries data. A substantially different setting, particularly common…

Machine Learning · Computer Science 2024-12-19 Minh Nguyen , Gia H. Ngo , Mert R. Sabuncu

Evaluating forecasts is essential to understand and improve forecasting and make forecasts useful to decision makers. A variety of R packages provide a broad variety of scoring rules, visualisations and diagnostic tools. One particular…

Methodology · Statistics 2024-11-04 Nikos I. Bosse , Hugo Gruson , Anne Cori , Edwin van Leeuwen , Sebastian Funk , Sam Abbott

The R package, Libra, stands for the LInearized BRegman Al- gorithm in high dimensional statistics. The Linearized Bregman Algorithm is a simple iterative procedure to generate sparse regularization paths of model estimation, which are…

Applications · Statistics 2016-04-21 Jiechao Xiong , Feng Ruan , Yuan Yao

The R package walker extends standard Bayesian general linear models to the case where the effects of the explanatory variables can vary in time. This allows, for example, to model the effects of interventions such as changes in tax policy…

Computation · Statistics 2022-04-13 Jouni Helske

In survival analysis, longitudinal information on the health status of a patient can be used to dynamically update the predicted probability that a patient will experience an event of interest. Traditional approaches to dynamic prediction…

Methodology · Statistics 2025-06-16 Mirko Signorelli

BDSAR is an R package which estimates distances between probability distributions and facilitates a dynamic and powerful analysis of diagnostics for Bayesian models from the class of Simultaneous Autoregressive (SAR) spatial models. The…

Computation · Statistics 2017-04-26 Ian M Danilevicz , Ricardo S Ehlers

Linear discriminant analysis (LDA) is a powerful tool in building classifiers with easy computation and interpretation. Recent advancements in science technology have led to the popularity of datasets with high dimensions, high orders and…

Computation · Statistics 2019-04-09 Yuqing Pan , Qing Mai , Xin Zhang