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Objective: This study investigates the potential of Large Language Models (LLMs) as an alternative to human expert elicitation for extracting structured causal knowledge and facilitating causal modeling in biometric and healthcare…

Artificial Intelligence · Computer Science 2025-04-15 Olha Shaposhnyk , Daria Zahorska , Svetlana Yanushkevich

Although recent advances in scaling large language models (LLMs) have resulted in improvements on many NLP tasks, it remains unclear whether these models trained primarily with general web text are the right tool in highly specialized,…

COVID-19 has led to hundreds of millions of cases and millions of deaths worldwide since its onset. The fight against this pandemic is on-going on multiple fronts. While vaccinations are picking up speed, there are still billions of…

Image and Video Processing · Electrical Eng. & Systems 2021-08-19 Mohammad Nayeem Teli

In search settings, calibrating the scores during the ranking process to quantities such as click-through rates or relevance levels enhances a system's usefulness and trustworthiness for downstream users. While previous research has…

Information Retrieval · Computer Science 2024-08-28 Puxuan Yu , Daniel Cohen , Hemank Lamba , Joel Tetreault , Alex Jaimes

Background: In this paper we present the approaches and methods employed in order to deal with a large scale multi-label semantic indexing task of biomedical papers. This work was mainly implemented within the context of the BioASQ…

Named entity recognition has been extensively studied on English news texts. However, the transfer to other domains and languages is still a challenging problem. In this paper, we describe the system with which we participated in the first…

Computation and Language · Computer Science 2020-07-03 Lukas Lange , Heike Adel , Jannik Strötgen

The FakeNews task in MediaEval 2022 investigates the challenge of finding accurate and high-performance models for the classification of conspiracy tweets related to COVID-19. In this paper, we used BERT, ELMO, and their combination for…

Computation and Language · Computer Science 2023-03-08 Abdul Rehman , Rabeeh Ayaz Abbasi , Irfan ul Haq Qureshi , Akmal Saeed Khattak

In recent times, the use of chest Computed Tomography (CT) images for detecting coronavirus infections has gained significant attention, owing to their ability to reveal bilateral changes in affected individuals. However, classifying…

Image and Video Processing · Electrical Eng. & Systems 2023-10-27 Amir Ali

The ongoing COVID-19 pandemic continues to pose significant challenges to global public health, despite the widespread availability of vaccines. Early detection of the disease remains paramount in curbing its transmission and mitigating its…

Machine Learning · Computer Science 2024-12-05 Mohsen Asghari Ilani , Saba Moftakhar Tehran , Ashkan Kavei , Arian Radmehr

The events of recent years have highlighted the importance of telemedicine solutions which could potentially allow remote treatment and diagnosis. Relatedly, Computational Paralinguistics, a unique subfield of Speech Processing, aims to…

Audio and Speech Processing · Electrical Eng. & Systems 2022-10-31 Tamás Grósz , Mittul Singh , Sudarsana Reddy Kadiri , Hemant Kathania , Mikko Kurimo

The fundamental process of evidence extraction and synthesis in evidence-based medicine involves extracting PICO (Population, Intervention, Comparison, and Outcome) elements from biomedical literature. However, Outcomes, being the most…

Computation and Language · Computer Science 2025-06-09 Yiliang Zhou , Abigail M. Newbury , Gongbo Zhang , Betina Ross Idnay , Hao Liu , Chunhua Weng , Yifan Peng

The application of large language models (LLMs) to healthcare information extraction has emerged as a promising approach. This study evaluates the classification performance of five open-source LLMs: GEMMA-3-27B-IT, LLAMA3-70B, LLAMA4-109B,…

Computation and Language · Computer Science 2025-05-09 Yuting Guo , Abeed Sarker

This study evaluates the effectiveness of Vision Language Models (VLMs) in representing and utilizing multimodal content for fact-checking. To be more specific, we investigate whether incorporating multimodal content improves performance…

Computation and Language · Computer Science 2024-12-09 Recep Firat Cekinel , Pinar Karagoz , Cagri Coltekin

Reading comprehension, a fundamental cognitive ability essential for knowledge acquisition, is a complex skill, with a notable number of learners lacking proficiency in this domain. This study introduces innovative tasks for Brain-Computer…

Human-Computer Interaction · Computer Science 2024-01-30 Yuhong Zhang , Shilai Yang , Gert Cauwenberghs , Tzyy-Ping Jung

We study the task of automatically finding evidence relevant to hypotheses in biomedical papers. Finding relevant evidence is an important step when researchers investigate scientific hypotheses. We introduce EvidenceBench to measure models…

Neural networks have recently been proposed for multi-label classification because they are able to capture and model label dependencies in the output layer. In this work, we investigate limitations of BP-MLL, a neural network (NN)…

Machine Learning · Computer Science 2020-12-09 Jinseok Nam , Jungi Kim , Eneldo Loza Mencía , Iryna Gurevych , Johannes Fürnkranz

Novel contexts may often arise in complex querying scenarios such as in evidence-based medicine (EBM) involving biomedical literature, that may not explicitly refer to entities or canonical concept forms occurring in any fact- or rule-based…

Computation and Language · Computer Science 2019-11-12 Manirupa Das , Juanxi Li , Eric Fosler-Lussier , Simon Lin , Soheil Moosavinasab , Steve Rust , Yungui Huang , Rajiv Ramnath

We propose yet another entity linking model (YELM) which links words to entities instead of spans. This overcomes any difficulties associated with the selection of good candidate mention spans and makes the joint training of mention…

Computation and Language · Computer Science 2020-11-10 Haotian Chen , Andrej Zukov-Gregoric , Xi David Li , Sahil Wadhwa

Pretrained language models have shown success in many natural language processing tasks. Many works explore incorporating knowledge into language models. In the biomedical domain, experts have taken decades of effort on building large-scale…

Computation and Language · Computer Science 2021-04-22 Zheng Yuan , Yijia Liu , Chuanqi Tan , Songfang Huang , Fei Huang

Large language models (LLMs) like ChatGPT can generate and revise text with human-level performance. These models come with clear limitations: they can produce inaccurate information, reinforce existing biases, and be easily misused. Yet,…

Computation and Language · Computer Science 2025-07-04 Dmitry Kobak , Rita González-Márquez , Emőke-Ágnes Horvát , Jan Lause