English
Related papers

Related papers: DNA mixture deconvolution using an evolutionary al…

200 papers

Background: DNA, RNA, and protein sequence motifs can be recognition sites for biological functions such as regulation, DNA base modification, and molecular binding in general. The gain and loss of such motifs can carry important…

Genomics · Quantitative Biology 2022-10-19 Afif Elghraoui , Faramarz Valafar

Beyond the generally deployed features for microstructure property prediction this study aims to improve the machine learned prediction by developing novel feature descriptors. Therefore, Bayesian infused data mining is conducted to acquire…

Machine Learning · Computer Science 2023-02-27 Julian Lißner , Felix Fritzen

To characterize natural selection, various analytical methods for detecting candidate genomic regions have been developed. We propose to perform genome-wide scans of natural selection using principal component analysis. We show that the…

Populations and Evolution · Quantitative Biology 2015-11-19 Nicolas Duforet-Frebourg , Keurcien Luu , Guillaume Laval , Eric Bazin , Michael G. B. Blum

Crowd management technologies that leverage computer vision are widespread in contemporary times. There exists many security-related applications of these methods, including, but not limited to: following the flow of an array of people and…

Computer Vision and Pattern Recognition · Computer Science 2020-08-18 Soufien Hamrouni , Hakim Ghazzai , Hamid Menouar , Yahya Massoud

Traditional Genetic Algorithms (GAs) mating schemes select individuals for crossover independently of their genotypic or phenotypic similarities. In Nature, this behaviour is known as random mating. However, non-random schemes - in which…

Neural and Evolutionary Computing · Computer Science 2009-09-30 C. M. Fernandes , J. J. Merelo , A. C. Rosa

DNA Methylation has been the most extensively studied epigenetic mark. Usually a change in the genotype, DNA sequence, leads to a change in the phenotype, observable characteristics of the individual. But DNA methylation, which happens in…

Genomics · Quantitative Biology 2018-07-26 Soham Chatterjee , Archana Iyer , Satya Avva , Abhai Kollara , Malaikannan Sankarasubbu

Neuroevolution is one of the methodologies that can be used for learning optimal architecture during training. It uses evolutionary algorithms to generate the topology of artificial neural networks and its parameters. The main benefits are…

Neural and Evolutionary Computing · Computer Science 2022-08-30 M. Pietroń , D. Żurek , K. Faber , R. Corizzo

In recent years, machine learning has achieved impressive results across different application areas. However, machine learning algorithms do not necessarily perform well on a new domain with a different distribution than its training set.…

Computer Vision and Pattern Recognition · Computer Science 2022-11-08 Ye Gao , Zhendong Chu , Hongning Wang , John Stankovic

Background: Continuous traits evolution of a group of taxa that are correlated through a phylogenetic tree is commonly modelled using parametric stochastic differential equations to represent deterministic change of trait through time,…

Populations and Evolution · Quantitative Biology 2026-04-03 Bayu Brahmantio , Krzysztof Bartoszek , Etka Yapar

Learning ensembles by bagging can substantially improve the generalization performance of low-bias, high-variance estimators, including those evolved by Genetic Programming (GP). To be efficient, modern GP algorithms for evolving (bagging)…

Neural and Evolutionary Computing · Computer Science 2021-02-08 Marco Virgolin

In this study, we build upon a previously proposed neuroevolution framework to evolve deep convolutional models. Specifically, the genome encoding and the crossover operator are extended to make them applicable to layered networks. We also…

Neural and Evolutionary Computing · Computer Science 2021-04-13 Alexander Hadjiivanov , Alan Blair

In forensic DNA calculations of relatedness of individuals and in DNA mixture analyses, two sources of uncertainty are present concerning the allele frequencies used for evaluating genotype probabilities when evaluating likelihoods. They…

Applications · Statistics 2015-10-07 Robert Cowell

Deep Generative Models (DGMs) are versatile tools for learning data representations while adequately incorporating domain knowledge such as the specification of conditional probability distributions. Recently proposed DGMs tackle the…

Machine Learning · Computer Science 2024-01-30 Romain Lopez , Jan-Christian Huetter , Ehsan Hajiramezanali , Jonathan Pritchard , Aviv Regev

Deep learning has shown unprecedented success in a variety of applications, such as computer vision and medical image analysis. However, there is still potential to improve segmentation in multimodal images by embedding prior knowledge via…

Image and Video Processing · Electrical Eng. & Systems 2019-10-24 Kibrom Berihu Girum , Gilles Créhange , Raabid Hussain , Paul Michael Walker , Alain Lalande

Most recent person re-identification approaches are based on the use of deep convolutional neural networks (CNNs). These networks, although effective in multiple tasks such as classification or object detection, tend to focus on the most…

Computer Vision and Pattern Recognition · Computer Science 2021-02-19 Abdallah Benzine , Mohamed El Amine Seddik , Julien Desmarais

Solving constrained multi-objective optimization problems with evolutionary algorithms has attracted considerable attention. Various constrained multi-objective optimization evolutionary algorithms (CMOEAs) have been developed with the use…

Artificial Intelligence · Computer Science 2024-02-21 Fei Ming , Wenyin Gong , Ling Wang , Yaochu Jin

As the number of dementia patients rises, the need for accurate diagnostic procedures rises as well. Current methods, like using an MRI scan, rely on human input, which can be inaccurate. However, the decision logic behind machine learning…

Image and Video Processing · Electrical Eng. & Systems 2024-06-28 Tyler Morris , Ziming Liu , Longjian Liu , Xiaopeng Zhao

The processes occurring in climatic change evolution and their variations play a major role in environmental engineering. Different techniques are used to model the relationship between temperatures, dew point and relative humidity. Gene…

Neural and Evolutionary Computing · Computer Science 2013-04-19 Siddharth Shroff , Vipul Dabhi

Decomposition has been the mainstream approach in the classic mathematical programming for multi-objective optimization and multi-criterion decision-making. However, it was not properly studied in the context of evolutionary multi-objective…

Neural and Evolutionary Computing · Computer Science 2021-08-24 Ke Li

Endmember (EM) spectral variability can greatly impact the performance of standard hyperspectral image analysis algorithms. Extended parametric models have been successfully applied to account for the EM spectral variability. However, these…

Computer Vision and Pattern Recognition · Computer Science 2019-11-22 Ricardo Augusto Borsoi , Tales Imbiriba , José Carlos Moreira Bermudez