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YAMLE: Yet Another Machine Learning Environment is an open-source framework that facilitates rapid prototyping and experimentation with machine learning (ML) models and methods. The key motivation is to reduce repetitive work when…

Machine Learning · Computer Science 2024-02-12 Martin Ferianc , Miguel Rodrigues

Classifying network traffic is the basis for important network applications. Prior research in this area has faced challenges on the availability of representative datasets, and many of the results cannot be readily reproduced. Such a…

Cryptography and Security · Computer Science 2020-04-29 Onur Barut , Yan Luo , Tong Zhang , Weigang Li , Peilong Li

Model Context Protocol (MCP) servers contain a collection of thousands of open-source standardized tools, linking LLMs to external systems; however, existing datasets and benchmarks lack realistic, human-like user queries, remaining a…

Artificial Intelligence · Computer Science 2026-03-02 Shubh Laddha , Lucas Changbencharoen , Win Kuptivej , Surya Shringla , Archana Vaidheeswaran , Yash Bhaskar

Comparing different AutoML frameworks is notoriously challenging and often done incorrectly. We introduce an open and extensible benchmark that follows best practices and avoids common mistakes when comparing AutoML frameworks. We conduct a…

To ensure the fairness and trustworthiness of machine learning (ML) systems, recent legislative initiatives and relevant research in the ML community have pointed out the need to document the data used to train ML models. Besides,…

Machine Learning · Computer Science 2024-12-18 Joan Giner-Miguelez , Abel Gómez , Jordi Cabot

We present POMDPPlanners, an open-source Python package for empirical evaluation of Partially Observable Markov Decision Process (POMDP) planning algorithms. The package integrates state-of-the-art planning algorithms, a suite of benchmark…

Artificial Intelligence · Computer Science 2026-02-25 Yaacov Pariente , Vadim Indelman

To facilitate the research on large language models (LLMs), this paper presents a comprehensive and unified library, LLMBox, to ease the development, use, and evaluation of LLMs. This library is featured with three main merits: (1) a…

As Machine Learning (ML) gains adoption across industries and new use cases, practitioners increasingly realize the challenges around effectively developing and iterating on ML systems: reproducibility, debugging, scalability, and…

Machine Learning · Computer Science 2023-03-22 Jacopo Tagliabue , Hugo Bowne-Anderson , Ville Tuulos , Savin Goyal , Romain Cledat , David Berg

Large Language Models (LLMs) have advanced rapidly as tools for automating code generation in scientific research, yet their ability to interpret and use unfamiliar Python APIs for complex computational experiments remains poorly…

Software Engineering · Computer Science 2025-09-17 Nuno Fachada , Daniel Fernandes , Carlos M. Fernandes , Bruno D. Ferreira-Saraiva , João P. Matos-Carvalho

Artificial intelligence (AI) techniques are widely applied in the life sciences. However, applying innovative AI techniques to understand and deconvolute biological complexity is hindered by the learning curve for life science scientists to…

Artificial Intelligence · Computer Science 2024-03-28 Nisha Pillai , Athish Ram Das , Moses Ayoola , Ganga Gireesan , Bindu Nanduri , Mahalingam Ramkumar

Statistical Parametric Mapping (SPM) is an integrated set of methods for testing hypotheses about the brain's structure and function, using data from imaging devices. These methods are implemented in an open source software package, SPM,…

The advancements in machine learning techniques have encouraged researchers to apply these techniques to a myriad of software engineering tasks that use source code analysis, such as testing and vulnerability detection. Such a large number…

Software Engineering · Computer Science 2022-09-14 Tushar Sharma , Maria Kechagia , Stefanos Georgiou , Rohit Tiwari , Indira Vats , Hadi Moazen , Federica Sarro

Large language models (LLMs) have revolutionized NLP research. Notably, in-context learning enables their use as evaluation metrics for natural language generation, making them particularly advantageous in low-resource scenarios and…

Computation and Language · Computer Science 2024-11-19 Christoph Leiter , Steffen Eger

Recent regulatory initiatives like the European AI Act and relevant voices in the Machine Learning (ML) community stress the need to describe datasets along several key dimensions for trustworthy AI, such as the provenance processes and…

Digital Libraries · Computer Science 2024-05-27 Joan Giner-Miguelez , Abel Gómez , Jordi Cabot

Raman spectroscopy is a non-destructive and label-free chemical analysis technique, which plays a key role in the analysis and discovery cycle of various branches of science. Nonetheless, progress in Raman spectroscopic analysis is still…

Progress in Machine Learning is often driven by the availability of large datasets, and consistent evaluation metrics for comparing modeling approaches. To this end, we present a repository of conversational datasets consisting of hundreds…

LLMs have gained immense popularity among researchers and the general public for its impressive capabilities on a variety of tasks. Notably, the efficacy of LLMs remains significantly dependent on the quality and structure of the input…

Machine Learning · Computer Science 2025-04-08 Wenliang Zheng , Sarkar Snigdha Sarathi Das , Yusen Zhang , Rui Zhang

Many modern cheminformatics workflows derive datasets from ChEMBL, but few of these datasets are published with accompanying code for their generation. Consequently, their methodologies (e.g., selection, filtering, aggregation) are opaque,…

Quantitative Methods · Quantitative Biology 2025-07-25 Charles Tapley Hoyt

Large Language Models (LLMs) have recently shown promise in streamlining hardware design processes by encapsulating vast amounts of domain-specific data. In addition, they allow users to interact with the design processes through natural…

Machine Learning · Computer Science 2024-07-04 Yongan Zhang , Zhongzhi Yu , Yonggan Fu , Cheng Wan , Yingyan Celine Lin

Large Language Models (LLMs) have demonstrated surprising performance across various natural language processing tasks. Recently, medical LLMs enhanced with domain-specific knowledge have exhibited excellent capabilities in medical…

Computation and Language · Computer Science 2024-09-24 Jinqiang Wang , Huansheng Ning , Yi Peng , Qikai Wei , Daniel Tesfai , Wenwei Mao , Tao Zhu , Runhe Huang