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We propose a semantic similarity metric for image registration. Existing metrics like euclidean distance or normalized cross-correlation focus on aligning intensity values, giving difficulties with low intensity contrast or noise. Our…

Computer Vision and Pattern Recognition · Computer Science 2020-11-12 Steffen Czolbe , Oswin Krause , Aasa Feragen

Interpretability is essential in medical imaging to ensure that clinicians can comprehend and trust artificial intelligence models. Several approaches have been recently considered to encode attributes in the latent space to enhance its…

Image and Video Processing · Electrical Eng. & Systems 2024-08-27 Maxime Di Folco , Cosmin I. Bercea , Emily Chan , Julia A. Schnabel

Rigid pre-registration involving local-global matching or other large deformation scenarios is crucial. Current popular methods rely on unsupervised learning based on grayscale similarity, but under circumstances where different poses lead…

Computer Vision and Pattern Recognition · Computer Science 2023-10-03 Lin Liu , Xinxin Fan , Haoyang Liu , Chulong Zhang , Weibin Kong , Jingjing Dai , Yuming Jiang , Yaoqin Xie , Xiaokun Liang

In image registration, many efforts have been devoted to the development of alternatives to the popular normalized mutual information criterion. Concurrently to these efforts, an increasing number of works have demonstrated that substantial…

Computer Vision and Pattern Recognition · Computer Science 2021-12-01 Vincent Jaouen , Pierre-Henri Conze , Guillaume Dardenne , Julien Bert , Dimitris Visvikis

Current fiducial marker detection algorithms rely on marker IDs for false positive rejection. Time is wasted on potential detections that will eventually be rejected as false positives. We introduce ChromaTag, a fiducial marker and…

Computer Vision and Pattern Recognition · Computer Science 2017-08-11 Joseph DeGol , Timothy Bretl , Derek Hoiem

Correlative imaging workflows are now widely used in bioimaging and aims to image the same sample using at least two different and complementary imaging modalities. Part of the workflow relies on finding the transformation linking a source…

Quantitative Methods · Quantitative Biology 2021-08-30 Guillaume Potier , Frédéric Lavancier , Stephan Kunne , Perrine Paul-Gilloteaux

LiDAR sensors are essential for autonomous systems, yet LiDAR fiducial markers (LFMs) lag behind visual fiducial markers (VFMs) in adoption and utility. Bridging this gap is vital for robotics and computer vision but challenging due to the…

Computer Vision and Pattern Recognition · Computer Science 2025-02-07 Yibo Liu

We introduce SparseVM, a method that registers clinical-quality 3D MR scans both faster and more accurately than previously possible. Deformable alignment, or registration, of clinical scans is a fundamental task for many clinical…

Computer Vision and Pattern Recognition · Computer Science 2020-04-07 Kathleen M. Lewis , Natalia S. Rost , John Guttag , Adrian V. Dalca

Fiducial markers are commonly used in navigation assisted minimally invasive spine surgery (MISS) and they help transfer image coordinates into real world coordinates. In practice, these markers might be located outside the field-of-view…

Image and Video Processing · Electrical Eng. & Systems 2022-10-12 Fuxin Fan , Björn Kreher , Holger Keil , Andreas Maier , Yixing Huang

X-ray computed tomography is a powerful tool for volumetric imaging, but requires the collection of a large number of low-noise projection images, which is often too time consuming, limiting its applicability. In our previous work…

Image and Video Processing · Electrical Eng. & Systems 2025-05-02 Zhenduo Shang , Thomas Blumensath

X-ray computed tomography is a powerful tool for volumetric imaging, where three-dimensional (3D) images are generated from a large number of individual X-ray projection images. Collecting the required number of low noise projection images…

Image and Video Processing · Electrical Eng. & Systems 2025-04-30 Zhenduo Shang , Thomas Blumensath

Reflectance Confocal Microscopy (RCM) is a non-invasive imaging technique used in biomedical research and clinical dermatology. It provides virtual high-resolution images of the skin and superficial tissues, reducing the need for physical…

Image and Video Processing · Electrical Eng. & Systems 2024-04-26 Hong-Jun Yoon , Chris Keum , Alexander Witkowski , Joanna Ludzik , Tracy Petrie , Heidi A. Hanson , Sancy A. Leachman

We propose a coercive approach to simultaneously register and segment multi-modal images which share similar spatial structure. Registration is done at the region level to facilitate data fusion while avoiding the need for interpolation.…

Computer Vision and Pattern Recognition · Computer Science 2015-11-19 Yu-Hui Chen , Dennis Wei , Gregory Newstadt , Jeffrey Simmons , Alfred Hero

Deformable registration has been one of the pillars of biomedical image computing. Conventional approaches refer to the definition of a similarity criterion that, once endowed with a deformation model and a smoothness constraint, determines…

Computer Vision and Pattern Recognition · Computer Science 2018-09-25 Enzo Ferrante , Puneet K. Dokania , Rafael Marini Silva , Nikos Paragios

The increasing use of generative ML foundation models for image restoration tasks such as super-resolution calls for robust and interpretable uncertainty quantification methods. We address this need by presenting a novel approach based on…

Computer Vision and Pattern Recognition · Computer Science 2025-11-05 Eduardo Adame , Daniel Csillag , Guilherme Tegoni Goedert

Imperceptible digital watermarking is important in copyright protection, misinformation prevention, and responsible generative AI. We propose TrustMark - a GAN-based watermarking method with novel design in architecture and spatio-spectra…

Computer Vision and Pattern Recognition · Computer Science 2023-12-01 Tu Bui , Shruti Agarwal , John Collomosse

Deformable image registration between Computed Tomography (CT) images and Magnetic Resonance (MR) imaging is essential for many image-guided therapies. In this paper, we propose a novel translation-based unsupervised deformable image…

Image and Video Processing · Electrical Eng. & Systems 2020-09-22 Zhe Xu , Jie Luo , Jiangpeng Yan , Ritvik Pulya , Xiu Li , William Wells , Jayender Jagadeesan

Microscopy images obtained from multiple camera lenses or sensors in biological experiments provide a comprehensive understanding of objects from diverse perspectives. However, using multiple microscope setups increases the risk of…

Image and Video Processing · Electrical Eng. & Systems 2024-07-18 Ruixiong Wang , Stephen Cross , Alin Achim

Confocal laser scanning microscopy (CLSM) stands out as one of the most widely used microscopy techniques, thanks to its three-dimensional imaging capability and its sub-diffraction spatial resolution, achieved through the closure of a…

We propose a fluid-based registration framework of medical images based on implicit neural representation. By integrating implicit neural representation and Large Deformable Diffeomorphic Metric Mapping (LDDMM), we employ a Multilayer…

Image and Video Processing · Electrical Eng. & Systems 2023-11-28 Chulong Zhang , Xiaokun Liang