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Single-cell omics enable the profiles of cells, which contain large numbers of biological features, to be quantified. Cluster analysis, a dimensionality reduction process, is used to reduce the dimensions of the data to make it…

Genomics · Quantitative Biology 2024-06-06 Okezue Bell , Arthur Lee , Elizabeth Engle

We present a general technique for the analysis of first-order methods. The technique relies on the construction of a duality gap for an appropriate approximation of the objective function, where the function approximation improves as the…

Optimization and Control · Mathematics 2019-12-12 Jelena Diakonikolas , Lorenzo Orecchia

This paper studies the approximation of generalized ridge functions, namely of functions which are constant along some submanifolds of $\mathbb{R}^N$. We introduce the notion of linear-sleeve functions, whose function values only depend on…

Numerical Analysis · Mathematics 2017-01-26 Sandra Keiper

Similarity between objects is multi-faceted and it can be easier for human annotators to measure it when the focus is on a specific aspect. We consider the problem of mapping objects into view-specific embeddings where the distance between…

Machine Learning · Statistics 2015-10-08 Liwen Zhang , Subhransu Maji , Ryota Tomioka

This paper considers scheduling on identical machines. The scheduling objective considered in this paper generalizes most scheduling minimization problems. In the problem, there are $n$ jobs and each job $j$ is associated with a…

Data Structures and Algorithms · Computer Science 2019-04-23 Benjamin Moseley

A regularized optimization problem over a large unstructured graph is studied, where the regularization term is tied to the graph geometry. Typical regularization examples include the total variation and the Laplacian regularizations over…

Optimization and Control · Mathematics 2017-12-20 Adil Salim , Pascal Bianchi , Walid Hachem

Clustering in high-dimensions poses many statistical challenges. While traditional distance-based clustering methods are computationally feasible, they lack probabilistic interpretation and rely on heuristics for estimation of the number of…

Methodology · Statistics 2023-04-04 Abhinav Natarajan , Maria De Iorio , Andreas Heinecke , Emanuel Mayer , Simon Glenn

In this two-part study we develop a unified approach to the analysis of the global exactness of various penalty and augmented Lagrangian functions for finite-dimensional constrained optimization problems. This approach allows one to verify…

Optimization and Control · Mathematics 2018-11-16 M. V. Dolgopolik

This paper proposes a novel method for high-quality image segmentation of both objects and scenes. Inspired by the dilation and erosion operations in morphological image processing techniques, the pixel-level image segmentation problems are…

Computer Vision and Pattern Recognition · Computer Science 2021-12-15 Hao He , Xiangtai Li , Yibo Yang , Guangliang Cheng , Yunhai Tong , Lubin Weng , Zhouchen Lin , Shiming Xiang

Consider the following toy problem. There are $m$ rectangles and $n$ points on the plane. Each rectangle $R$ is a consumer with budget $B_R$, who is interested in purchasing the cheapest item (point) inside R, given that she has enough…

Computer Science and Game Theory · Computer Science 2012-07-25 Parinya Chalermsook , Khaled Elbassioni , Danupon Nanongkai , He Sun

Several data analysis techniques employ similarity relationships between data points to uncover the intrinsic dimension and geometric structure of the underlying data-generating mechanism. In this paper we work under the model assumption…

Machine Learning · Statistics 2019-04-09 Nicolas Garcia Trillos , Daniel Sanz-Alonso , Ruiyi Yang

In this paper, we formulate a top-k query that compares objects in a database to a user-provided query object on a novel scoring function. The proposed scoring function combines the idea of attractive and repulsive dimensions into a general…

Databases · Computer Science 2011-12-01 Sayan Ranu , Ambuj K. Singh

The input to the distant representatives problem is a set of $n$ objects in the plane and the goal is to find a representative point from each object while maximizing the distance between the closest pair of points. When the objects are…

Computational Geometry · Computer Science 2021-08-18 Therese Biedl , Anna Lubiw , Anurag Murty Naredla , Peter Dominik Ralbovsky , Graeme Stroud

In this paper, we propose a new method for determining shared features of and measuring the distance between data sets or point clouds. Our approach uses the joint factorization of two data matrices $X_1,X_2$ into non-negative matrices $X_1…

Machine Learning · Computer Science 2022-11-29 Hannah Friedman , Amani R. Maina-Kilaas , Julianna Schalkwyk , Hina Ahmed , Jamie Haddock

The graph matching optimization problem is an essential component for many tasks in computer vision, such as bringing two deformable objects in correspondence. Naturally, a wide range of applicable algorithms have been proposed in the last…

Computer Vision and Pattern Recognition · Computer Science 2022-08-01 Stefan Haller , Lorenz Feineis , Lisa Hutschenreiter , Florian Bernard , Carsten Rother , Dagmar Kainmüller , Paul Swoboda , Bogdan Savchynskyy

Feature extraction and matching are among central problems of computer vision. It is inefficent to search features over all locations and scales. Neurophysiological evidence shows that to locate objects in a digital image the human visual…

Computer Vision and Pattern Recognition · Computer Science 2007-05-23 Liang Wu

Clustering is a fundamental unsupervised learning approach. Many clustering algorithms -- such as $k$-means -- rely on the euclidean distance as a similarity measure, which is often not the most relevant metric for high dimensional data…

Machine Learning · Computer Science 2019-10-22 Aude Genevay , Gabriel Dulac-Arnold , Jean-Philippe Vert

During the training of networks for distance metric learning, minimizers of the typical loss functions can be considered as "feasible points" satisfying a set of constraints imposed by the training data. To this end, we reformulate distance…

Computer Vision and Pattern Recognition · Computer Science 2023-07-18 Oğul Can , Yeti Ziya Gürbüz , A. Aydın Alatan

Complementarity problems and variational inequalities arise in a wide variety of areas, including machine learning, planning, game theory, and physical simulation. In all of these areas, to handle large-scale problem instances, we need fast…

Machine Learning · Computer Science 2013-06-21 Geoffrey J. Gordon

Dimension reduction and visualization of high-dimensional data have become very important research topics because of the rapid growth of large databases in data science. In this paper, we propose using a generalized sigmoid function to…

Machine Learning · Statistics 2020-07-20 Yu Liang , Arin Chaudhuri , Haoyu Wang