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Automatic segmentation of the left ventricle (LV) in late gadolinium enhanced (LGE) cardiac MR (CMR) images is difficult due to the intensity heterogeneity arising from accumulation of contrast agent in infarcted myocardium. In this paper,…

Image and Video Processing · Electrical Eng. & Systems 2022-05-24 Dong Wei , Ying Sun , Sim-Heng Ong , Ping Chai , Lynette L. Teo , Adrian F. Low

Functional MRI (fMRI) is an important tool for non-invasive studies of brain function. Over the past decade, multi-echo fMRI methods that sample multiple echo times has become popular with potential to improve quantification. While these…

Image and Video Processing · Electrical Eng. & Systems 2023-12-12 Hongyi Gu , Chi Zhang , Zidan Yu , Christoph Rettenmeier , V. Andrew Stenger , Mehmet Akçakaya

Cardiomyopathy, a principal contributor to heart failure and sudden cardiac mortality, demands precise early screening. Cardiac Magnetic Resonance (CMR), recognized as the diagnostic 'gold standard' through multiparametric protocols, holds…

Computer Vision and Pattern Recognition · Computer Science 2025-08-26 Siqing Yuan , Yulin Wang , Zirui Cao , Yueyan Wang , Zehao Weng , Hui Wang , Lei Xu , Zixian Chen , Lei Chen , Zhong Xue , Dinggang Shen

High spatial and temporal resolution across the whole brain is essential to accurately resolve neural activities in fMRI. Therefore, accelerated imaging techniques target improved coverage with high spatio-temporal resolution. Simultaneous…

Image and Video Processing · Electrical Eng. & Systems 2021-05-13 Omer Burak Demirel , Burhaneddin Yaman , Logan Dowdle , Steen Moeller , Luca Vizioli , Essa Yacoub , John Strupp , Cheryl A. Olman , Kâmil Uğurbil , Mehmet Akçakaya

Cardiac MRI late gadolinium enhancement (LGE) enables non-invasive identification of left atrial (LA) scar, whose spatial distribution is strongly associated with atrial fibrillation (AF) severity and recurrence. However, automatic LA scar…

Computer Vision and Pattern Recognition · Computer Science 2026-03-30 Jing Zhang , Bastien Bergere , Emilie Bollache , Jonas Leite , Mikaël Laredo , Alban Redheuil , Nadjia Kachenoura

While functional Magnetic Resonance Imaging (fMRI) offers valuable insights into cognitive processes, its inherent spatial limitations pose challenges for detailed analysis of the fine-grained functional architecture of the brain. More…

Image and Video Processing · Electrical Eng. & Systems 2025-02-25 Fernando Pérez-Bueno , Hongwei Bran Li , Matthew S. Rosen , Shahin Nasr , Cesar Caballero-Gaudes , Juan Eugenio Iglesias

Deep learning (DL) has emerged as a leading approach in accelerating MR imaging. It employs deep neural networks to extract knowledge from available datasets and then applies the trained networks to reconstruct accurate images from limited…

Image and Video Processing · Electrical Eng. & Systems 2024-02-06 Shanshan Wang , Ruoyou Wu , Sen Jia , Alou Diakite , Cheng Li , Qiegen Liu , Leslie Ying

Multi-contrast MRI images provide complementary contrast information about the characteristics of anatomical structures and are commonly used in clinical practice. Recently, a multi-flip-angle (FA) and multi-echo GRE method (MULTIPLEX MRI)…

Image and Video Processing · Electrical Eng. & Systems 2021-05-19 Eric Z. Chen , Yongquan Ye , Xiao Chen , Jingyuan Lyu , Zhongqi Zhang , Yichen Hu , Terrence Chen , Jian Xu , Shanhui Sun

Deep learning (DL) based unrolled reconstructions have shown state-of-the-art performance for under-sampled magnetic resonance imaging (MRI). Similar to compressed sensing, DL can leverage high-dimensional data (e.g. 3D, 2D+time, 3D+time)…

Image and Video Processing · Electrical Eng. & Systems 2021-03-09 Ke Wang , Michael Kellman , Christopher M. Sandino , Kevin Zhang , Shreyas S. Vasanawala , Jonathan I. Tamir , Stella X. Yu , Michael Lustig

Significance: Late gadolinium enhanced magnetic resonance imaging (LGE-MRI) is the gold standard technique for myocardial viability assessment. Although the technique accurately reflects the damaged tissue, there is no clinical standard for…

Computer Vision and Pattern Recognition · Computer Science 2022-04-27 Ezequiel de la Rosa , Désiré Sidibé , Thomas Decourselle , Thibault Leclercq , Alexandre Cochet , Alain Lalande

Lately, deep learning has been extensively investigated for accelerating dynamic magnetic resonance (MR) imaging, with encouraging progresses achieved. However, without fully sampled reference data for training, current approaches may have…

Image and Video Processing · Electrical Eng. & Systems 2022-08-09 Juan Zou , Cheng Li , Sen Jia , Ruoyou Wu , Tingrui Pei , Hairong Zheng , Shanshan Wang

Accurate segmentation of myocardial scar from late gadolinium enhanced (LGE) cardiac MRI is essential for evaluating tissue viability, yet remains challenging due to variable contrast and imaging artifacts. Electrocardiogram (ECG) signals…

Computer Vision and Pattern Recognition · Computer Science 2026-04-02 Farheen Ramzan , Yusuf Kiberu , Nikesh Jathanna , Meryem Jabrane , Vicente Grau , Shahnaz Jamil-Copley , Richard H. Clayton , Chen , Chen

Functional MRI (fMRI) is commonly used for interpreting neural activities across the brain. Numerous accelerated fMRI techniques aim to provide improved spatiotemporal resolutions. Among these, simultaneous multi-slice (SMS) imaging has…

Image and Video Processing · Electrical Eng. & Systems 2021-05-11 Omer Burak Demirel , Burhaneddin Yaman , Logan Dowdle , Steen Moeller , Luca Vizioli , Essa Yacoub , John Strupp , Cheryl A. Olman , Kâmil Uğurbil , Mehmet Akçakaya

Unrolled neural networks have recently achieved state-of-the-art accelerated MRI reconstruction. These networks unroll iterative optimization algorithms by alternating between physics-based consistency and neural-network based…

Image and Video Processing · Electrical Eng. & Systems 2022-07-19 Batu Ozturkler , Arda Sahiner , Tolga Ergen , Arjun D Desai , Christopher M Sandino , Shreyas Vasanawala , John M Pauly , Morteza Mardani , Mert Pilanci

Purpose: To investigate motion compensated, self-supervised, model based deep learning (MBDL) as a method to reconstruct free breathing, 3D Pulmonary ultrashort echo time (UTE) acquisitions. Theory and Methods: A self-supervised eXtra…

Medical Physics · Physics 2022-10-11 Zachary Miller , Kevin Johnson

Deep learning (DL) has emerged as a tool for improving accelerated MRI reconstruction. A common strategy among DL methods is the physics-based approach, where a regularized iterative algorithm alternating between data consistency and a…

Image and Video Processing · Electrical Eng. & Systems 2020-07-03 Burhaneddin Yaman , Seyed Amir Hossein Hosseini , Steen Moeller , Jutta Ellermann , Kâmil Uǧurbil , Mehmet Akçakaya

Three-dimensional late gadolinium enhanced (LGE) cardiac MR (CMR) of left atrial scar in patients with atrial fibrillation (AF) has recently emerged as a promising technique to stratify patients, to guide ablation therapy and to predict…

Image and Video Processing · Electrical Eng. & Systems 2020-02-04 Guang Yang , Jun Chen , Zhifan Gao , Shuo Li , Hao Ni , Elsa Angelini , Tom Wong , Raad Mohiaddin , Eva Nyktari , Ricardo Wage , Lei Xu , Yanping Zhang , Xiuquan Du , Heye Zhang , David Firmin , Jennifer Keegan

Background: The clinical utility of late gadolinium enhancement (LGE) cardiac MRI is limited by the lack of standardization, and time-consuming postprocessing. In this work, we tested the hypothesis that a cascaded deep learning pipeline…

Image and Video Processing · Electrical Eng. & Systems 2021-09-28 Didier R. P. R. M. Lustermans , Sina Amirrajab , Mitko Veta , Marcel Breeuwer , Cian M. Scannell

We propose an unsupervised deep learning algorithm for the motion-compensated reconstruction of 5D cardiac MRI data from 3D radial acquisitions. Ungated free-breathing 5D MRI simplifies the scan planning, improves patient comfort, and…

Image and Video Processing · Electrical Eng. & Systems 2023-09-12 Joseph Kettelkamp , Ludovica Romanin , Davide Piccini , Sarv Priya , Mathews Jacob

Dynamic magnetic resonance imaging (MRI) plays an indispensable role in cardiac diagnosis. To enable fast imaging, the k-space data can be undersampled but the image reconstruction poses a great challenge of high-dimensional processing.…

Image and Video Processing · Electrical Eng. & Systems 2024-10-03 Zi Wang , Min Xiao , Yirong Zhou , Chengyan Wang , Naiming Wu , Yi Li , Yiwen Gong , Shufu Chang , Yinyin Chen , Liuhong Zhu , Jianjun Zhou , Congbo Cai , He Wang , Di Guo , Guang Yang , Xiaobo Qu