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We present a weakly supervised deep learning method to perform instance segmentation of cells present in microscopy images. Annotation of biomedical images in the lab can be scarce, incomplete, and inaccurate. This is of concern when…

Computer Vision and Pattern Recognition · Computer Science 2019-08-28 Fidel A. Guerrero-Peña , Pedro D. Marrero Fernandez , Tsang Ing Ren , Alexandre Cunha

Deep learning models, e.g. supervised Encoder-Decoder style networks, exhibit promising performance in medical image segmentation, but come with a high labelling cost. We propose TriSegNet, a semi-supervised semantic segmentation framework.…

Image and Video Processing · Electrical Eng. & Systems 2022-08-15 Ziyang Wang , Irina Voiculescu

Dataset creation is typically one of the first steps when applying Artificial Intelligence methods to a new task; and the real world performance of models hinges on the quality and quantity of data available. Producing an image dataset for…

Computer Vision and Pattern Recognition · Computer Science 2018-07-10 Will Nash , Tom Drummond , Nick Birbilis

Unsupervised semantic segmentation is a challenging task that segments images into semantic groups without manual annotation. Prior works have primarily focused on leveraging prior knowledge of semantic consistency or priori concepts from…

Computer Vision and Pattern Recognition · Computer Science 2023-10-30 Mengcheng Lan , Xinjiang Wang , Yiping Ke , Jiaxing Xu , Litong Feng , Wayne Zhang

Usually, lesions are not isolated but are associated with the surrounding tissues. For example, the growth of a tumour can depend on or infiltrate into the surrounding tissues. Due to the pathological nature of the lesions, it is…

Image and Video Processing · Electrical Eng. & Systems 2022-10-12 Lin Wang , Xiufen Ye , Donghao Zhang , Wanji He , Lie Ju , Yi Luo , Huan Luo , Xin Wang , Wei Feng , Kaimin Song , Xin Zhao , Zongyuan Ge

Supervised machine learning based state-of-the-art computer vision techniques are in general data hungry and pose the challenges of not having adequate computing resources and of high costs involved in human labeling efforts. Training data…

Computer Vision and Pattern Recognition · Computer Science 2018-05-30 Vishal Kaushal , Anurag Sahoo , Khoshrav Doctor , Narasimha Raju , Suyash Shetty , Pankaj Singh , Rishabh Iyer , Ganesh Ramakrishnan

Semantic segmentation has achieved remarkable progress but remains challenging due to the complex scene, object occlusion, and so on. Some research works have attempted to use extra information such as a depth map to help RGB based semantic…

Computer Vision and Pattern Recognition · Computer Science 2020-03-12 Zhangxuan Gu , Li Niu , Haohua Zhao , Liqing Zhang

Semantic segmentation of remote sensing (RS) images is a challenging yet essential task with broad applications. While deep learning, particularly supervised learning with large-scale labeled datasets, has significantly advanced this field,…

Computer Vision and Pattern Recognition · Computer Science 2024-12-02 Bin Wang , Fei Deng , Shuang Wang , Wen Luo , Zhixuan Zhang , Peifan Jiang

Noisy labels can significantly impact medical image classification, particularly in deep learning, by corrupting learned features. Self-supervised pretraining, which doesn't rely on labeled data, can enhance robustness against noisy labels.…

Image and Video Processing · Electrical Eng. & Systems 2024-01-17 Bidur Khanal , Binod Bhattarai , Bishesh Khanal , Cristian Linte

Recent years have witnessed the great progress of deep neural networks on semantic segmentation, particularly in medical imaging. Nevertheless, training high-performing models require large amounts of pixel-level ground truth masks, which…

Computer Vision and Pattern Recognition · Computer Science 2020-04-10 Abdur R Feyjie , Reza Azad , Marco Pedersoli , Claude Kauffman , Ismail Ben Ayed , Jose Dolz

Active learning is a unique abstraction of machine learning techniques where the model/algorithm could guide users for annotation of a set of data points that would be beneficial to the model, unlike passive machine learning. The primary…

Computer Vision and Pattern Recognition · Computer Science 2021-01-08 Vishwesh Nath , Dong Yang , Bennett A. Landman , Daguang Xu , Holger R. Roth

Microscopy image analysis often requires the segmentation of objects, but training data for this task is typically scarce and hard to obtain. Here we propose DenoiSeg, a new method that can be trained end-to-end on only a few annotated…

Computer Vision and Pattern Recognition · Computer Science 2020-06-12 Tim-Oliver Buchholz , Mangal Prakash , Alexander Krull , Florian Jug

Scene understanding and semantic segmentation are at the core of many computer vision tasks, many of which, involve interacting with humans in potentially dangerous ways. It is therefore paramount that techniques for principled design of…

Computer Vision and Pattern Recognition · Computer Science 2019-06-03 Charles Lehman , Dogancan Temel , Ghassan AlRegib

Segmenting small lesions in medical images remains notoriously difficult. Most prior work tackles this challenge by either designing better architectures, loss functions, or data augmentation schemes; and collecting more labeled data. We…

Computer Vision and Pattern Recognition · Computer Science 2025-11-25 Rachit Saluja , Asli Cihangir , Ruining Deng , Johannes C. Paetzold , Fengbei Liu , Mert R. Sabuncu

Continual learning protocols are attracting increasing attention from the medical imaging community. In continual environments, datasets acquired under different conditions arrive sequentially; and each is only available for a limited…

Computer Vision and Pattern Recognition · Computer Science 2023-02-13 Camila Gonzalez , Nick Lemke , Georgios Sakas , Anirban Mukhopadhyay

Often when multiple labels are obtained for a training example it is assumed that there is an element of noise that must be accounted for. It has been shown that this disagreement can be considered signal instead of noise. In this work we…

Computation and Language · Computer Science 2019-01-28 John P. Lalor , Hao Wu , Hong Yu

Large-scale vision models like SAM have extensive visual knowledge, yet their general nature and computational demands limit their use in specialized tasks like medical image segmentation. In contrast, task-specific models such as U-Net++…

Image and Video Processing · Electrical Eng. & Systems 2025-03-11 Yuchen Mao , Hongwei Li , Yinyi Lai , Giorgos Papanastasiou , Peng Qi , Yunjie Yang , Chengjia Wang

Convolutional neural networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they have not demonstrated sufficiently accurate and robust results for clinical use. In addition, they are…

Computer Vision and Pattern Recognition · Computer Science 2018-07-23 Guotai Wang , Wenqi Li , Maria A. Zuluaga , Rosalind Pratt , Premal A. Patel , Michael Aertsen , Tom Doel , Anna L. David , Jan Deprest , Sebastien Ourselin , Tom Vercauteren

Supervised deep learning for semantic segmentation has achieved excellent results in accurately identifying anatomical and pathological structures in medical images. However, it often requires large annotated training datasets, which limits…

Computer Vision and Pattern Recognition · Computer Science 2026-03-11 Luca Ciampi , Gabriele Lagani , Giuseppe Amato , Fabrizio Falchi

Learning discriminative representations is a central goal of supervised deep learning. While cross-entropy (CE) remains the dominant objective for classification, it does not explicitly enforce desirable geometric properties in the…

Machine Learning · Computer Science 2026-04-13 Matheus Vinícius Todescato , Joel Luís Carbonera