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We revisit the classical population genetics model of a population evolving under multiplicative selection, mutation and drift. The number of beneficial alleles in a multi-locus system can be considered a trait under exponential selection.…

adap-org · Physics 2007-05-23 Magnus Rattray , Jonathan L. Shapiro

A greedy randomized augmented Kaczmarz (GRAK) method was proposed in [Z.-Z. Bai and W.-T. WU, SIAM J. Sci. Comput., 43 (2021), pp. A3892-A3911] for large and sparse inconsistent linear systems. However, one has to construct two new index…

Numerical Analysis · Mathematics 2023-10-24 Shunchang Li , Gang Wu

Capture-recapture studies are widely used to obtain information about abundance (population size or density) of animal populations. A common design is that in which multiple distinct populations are sampled, and the research objective is…

Methodology · Statistics 2012-11-27 J. Andrew Royle , Sarah J. Converse , William A. Link

Evolution by Natural Selection is a process by which progeny inherit some properties from their progenitors with small variation. These properties are subject to Natural Selection and are called adaptive traits and carriers of the latter…

Analysis of PDEs · Mathematics 2024-01-29 Gonzalo Galiano , Yosef Cohen

We introduce a model for the evolution of species triggered by generation of novel features and exhaustive combination with other available traits. Under the assumption that innovations are rare, we obtain a bursty branching process of…

Populations and Evolution · Quantitative Biology 2014-01-29 Stephanie Keller-Schmidt , Konstantin Klemm

In ecology, the description of species composition and biodiversity calls for statistical methods that involve estimating features of interest in unobserved samples based on an observed one. In the last decade, the Bayesian nonparametrics…

Methodology · Statistics 2026-04-28 Alessandro Colombi , Raffaele Argiento , Federico Camerlenghi , Lucia Paci

In this paper we consider a variety of procedures for numerical statistical inference in the family of univariate and multivariate stable distributions. In connection with univariate distributions (i) we provide approximations by finite…

Computation · Statistics 2012-09-04 Efthymios G. Tsionas

Predicting species persistence within ecological communities is a fundamental challenge for both empirical and theoretical ecology. Existing methods span from mechanistic models, whose parameters are difficult to estimate from data, to…

Populations and Evolution · Quantitative Biology 2026-04-30 Davide Bernardi , Giorgio Nicoletti , Prajwal Padmanabha , Samir Suweis , Sandro Azaele , Simon A. Levin , Andrea Rinaldo , Amos Maritan

Stochastic differential equations (SDEs) are a fundamental tool for modelling dynamic processes, including gene regulatory networks (GRNs), contaminant transport, financial markets, and image generation. However, learning the underlying SDE…

With growing data volumes from synoptic surveys, astronomers must become more abstracted from the discovery and introspection processes. Given the scarcity of follow-up resources, there is a particularly sharp onus on the frameworks that…

Instrumentation and Methods for Astrophysics · Physics 2015-06-04 Joseph W. Richards , Dan L. Starr , Adam A. Miller , Joshua S. Bloom , Nathaniel R. Butler , Henrik Brink , Arien Crellin-Quick

A generalization of the ABC model, a one-dimensional model of a driven system of three particle species with local dynamics, is introduced, in which the model evolves under either (i) density-conserving or (ii) nonconserving dynamics. For…

Statistical Mechanics · Physics 2015-05-19 A. Lederhendler , D. Mukamel

Statistical inference on biodiversity has a rich history going back to RA Fisher. An influential ecological theory suggests the existence of a fundamental biodiversity number, denoted $\alpha$, which coincides with the precision parameter…

Methodology · Statistics 2025-02-04 Tommaso Rigon , Ching-Lung Hsu , David B. Dunson

Using graphical methods based on a `lookdown' and pruned version of the {\em ancestral selection graph}, we obtain a representation of the type distribution of the ancestor in a two-type Wright-Fisher population with mutation and selection,…

Probability · Mathematics 2020-03-17 Ellen Baake , Ute Lenz , Anton Wakolbinger

We introduce Exponential Family Discriminant Analysis (EFDA), a unified generative framework that extends classical Linear Discriminant Analysis (LDA) beyond the Gaussian setting to any member of the exponential family. Under the assumption…

Machine Learning · Computer Science 2026-03-25 Anish Lakkapragada

We propose a new class of semiparametric exponential family graphical models for the analysis of high dimensional mixed data. Different from the existing mixed graphical models, we allow the nodewise conditional distributions to be…

Machine Learning · Statistics 2015-10-16 Zhuoran Yang , Yang Ning , Han Liu

This work considers the problem of learning the structure of multivariate linear tree models, which include a variety of directed tree graphical models with continuous, discrete, and mixed latent variables such as linear-Gaussian models,…

Machine Learning · Computer Science 2011-11-09 Animashree Anandkumar , Kamalika Chaudhuri , Daniel Hsu , Sham M. Kakade , Le Song , Tong Zhang

We develop a new class of distribution--free multiple testing rules for false discovery rate (FDR) control under general dependence. A key element in our proposal is a symmetrized data aggregation (SDA) approach to incorporating the…

Methodology · Statistics 2021-05-27 Lilun Du , Xu Guo , Wenguang Sun , Changliang Zou

We investigate vertex levels of containment in a random hypergraph grown in the spirit of a recursive tree. We consider a local profile tracking the evolution of the containment of a particular vertex over time, and a global profile…

Probability · Mathematics 2021-01-19 Joshua Sparks , Srinivasan Balaji , Hosam Mahmoud

Unsupervised Anomaly Detection (UAD) plays a crucial role in identifying abnormal patterns within data without labeled examples, holding significant practical implications across various domains. Although the individual contributions of…

Machine Learning · Computer Science 2024-06-04 Zeyu Fang , Ming Gu , Sheng Zhou , Jiawei Chen , Qiaoyu Tan , Haishuai Wang , Jiajun Bu

We present a theory of ensemble diversity, explaining the nature of diversity for a wide range of supervised learning scenarios. This challenge has been referred to as the holy grail of ensemble learning, an open research issue for over 30…

Machine Learning · Computer Science 2024-02-08 Danny Wood , Tingting Mu , Andrew Webb , Henry Reeve , Mikel Luján , Gavin Brown